Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.52□□□□□ -1.37
ALDH1A1P00352 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ALDH1A1P00352 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ALDH1A1P00352 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ALDH1A1P00352 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 AL591848.4-201ENST00000567832 3472 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 RNU6-562P-201ENST00000362731 107 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 RNY3P13-201ENST00000365542 102 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC110754.1-201ENST00000399740 601 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AL356421.1-201ENST00000403255 413 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 DNAJC19P7-201ENST00000428811 344 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC010881.1-201ENST00000433830 235 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 OR6D1P-201ENST00000436165 939 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 RPL21P93-201ENST00000480465 489 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC021146.3-201ENST00000511911 260 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AL671862.1-201ENST00000515851 349 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 MIR2117-201ENST00000516780 80 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 IGKV2D-23-201ENST00000518179 286 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 DEFB109D-201ENST00000529497 240 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 HSPE1P20-201ENST00000538133 289 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 HSBP1P1-201ENST00000555205 166 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC068790.3-201ENST00000602988 553 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AP001486.3-201ENST00000615334 372 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 ATP5A1P2-202ENST00000616464 443 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 TCL6_3.1-201ENST00000619064 137 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC244100.1-202ENST00000621554 382 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC091953.3-201ENST00000623220 236 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AC127459.3-201ENST00000624328 466 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 AL353662.3-201ENST00000625131 237 ntBASIC6.51□□□□□ -1.37
ALDH1A1P00352 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ALDH1A1P00352 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.51□□□□□ -1.37
ALDH1A1P00352 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC110373.1-201ENST00000505994 3505 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 AL355488.2-201ENST00000609909 2850 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 TNPO1P2-201ENST00000426249 2665 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 Y_RNA.20-201ENST00000362479 113 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 RNU1-43P-201ENST00000365052 165 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 EIF5P1-201ENST00000400019 1231 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 MIR450B-201ENST00000401182 78 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 RBMY1KP-201ENST00000423480 476 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC093655.2-201ENST00000425735 631 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC073069.1-201ENST00000428657 441 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 TMSB4XP3-201ENST00000445144 114 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AL162388.1-201ENST00000450912 352 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC092647.2-201ENST00000452998 253 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 RPS23P2-201ENST00000463671 415 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 TXNP6-201ENST00000510190 310 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC078899.1-201ENST00000521432 1185 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 HMGB1P50-201ENST00000605814 607 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 DUSP12P1-201ENST00000612874 516 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC011155.2-201ENST00000623202 216 ntBASIC6.5□□□□□ -1.37
ALDH1A1P00352 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ALDH1A1P00352 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
ALDH1A1P00352 AC114947.2-201ENST00000565748 2125 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms