Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LDB3O75112 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 SNORA4.1-201ENST00000364263 144 ntBASIC3.91□□□□□ -1.78
LDB3O75112 RNU6-660P-201ENST00000364566 109 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC068538.1-201ENST00000376856 336 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC136624.1-201ENST00000400791 413 ntBASIC3.91□□□□□ -1.78
LDB3O75112 MIR1284-201ENST00000408337 120 ntBASIC3.91□□□□□ -1.78
LDB3O75112 MIR548F1-201ENST00000408667 84 ntBASIC3.91□□□□□ -1.78
LDB3O75112 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDB3O75112 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 AC008065.1-201ENST00000428525 348 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 MRPS10P2-201ENST00000431226 381 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 MTND1P30-201ENST00000441241 901 ntBASIC3.91□□□□□ -1.78
LDB3O75112 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 COX6CP2-201ENST00000444980 225 ntBASIC3.91□□□□□ -1.78
LDB3O75112 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDB3O75112 RPL36AP33-201ENST00000450395 310 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 CFTRP1-201ENST00000456646 183 ntBASIC3.91□□□□□ -1.78
LDB3O75112 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 snoU13.7-201ENST00000459220 104 ntBASIC3.91□□□□□ -1.78
LDB3O75112 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDB3O75112 AC093281.2-201ENST00000510153 597 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC006499.6-201ENST00000511169 607 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 DUXAP2-201ENST00000519198 589 ntBASIC3.91□□□□□ -1.78
LDB3O75112 IFITM8P-201ENST00000522529 394 ntBASIC3.91□□□□□ -1.78
LDB3O75112 PTP4A1P6-201ENST00000531034 478 ntBASIC3.91□□□□□ -1.78
LDB3O75112 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDB3O75112 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 OR7K1P-201ENST00000546439 926 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.91□□□□□ -1.78
LDB3O75112 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 GTF2IP22-201ENST00000554443 182 ntBASIC3.91□□□□□ -1.78
LDB3O75112 EIF5A2P1-201ENST00000564027 460 ntBASIC3.91□□□□□ -1.78
LDB3O75112 CYP4A43P-201ENST00000568156 121 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.91□□□□□ -1.78
LDB3O75112 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 VN1R92P-201ENST00000598511 928 ntBASIC3.91□□□□□ -1.78
LDB3O75112 MTCYBP22-201ENST00000603788 447 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC069304.2-201ENST00000605154 435 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC092354.1-201ENST00000606057 376 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC138749.5-201ENST00000611461 208 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AL357080.1-201ENST00000617394 239 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AC092650.2-201ENST00000619984 902 ntBASIC3.91□□□□□ -1.78
LDB3O75112 AL356266.1-201ENST00000623311 483 ntBASIC3.91□□□□□ -1.78
LDB3O75112 MIR6715B-201ENST00000637172 77 ntBASIC3.91□□□□□ -1.78
LDB3O75112 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
LDB3O75112 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.91□□□□□ -1.78
LDB3O75112 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LDB3O75112 ZNF37BP-203ENST00000452306 1352 ntBASIC3.9□□□□□ -1.78
LDB3O75112 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
LDB3O75112 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
LDB3O75112 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LDB3O75112 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LDB3O75112 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
LDB3O75112 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LDB3O75112 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDB3O75112 Y_RNA.6-201ENST00000362350 114 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RNY3P14-201ENST00000384309 102 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RNU6-1122P-201ENST00000384449 107 ntBASIC3.9□□□□□ -1.79
LDB3O75112 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LDB3O75112 DSTNP4-201ENST00000399472 474 ntBASIC3.9□□□□□ -1.79
LDB3O75112 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LDB3O75112 MTND1P21-201ENST00000412991 285 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RPS15AP38-201ENST00000413110 372 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC004987.3-201ENST00000413879 771 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB3O75112 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB3O75112 COX6CP15-201ENST00000426313 211 ntBASIC3.9□□□□□ -1.79
LDB3O75112 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.9□□□□□ -1.79
LDB3O75112 USP9YP35-201ENST00000435696 412 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
LDB3O75112 AC092641.1-201ENST00000440229 772 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RBMX2P4-201ENST00000441256 376 ntBASIC3.9□□□□□ -1.79
LDB3O75112 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.9□□□□□ -1.79
LDB3O75112 ST13P20-201ENST00000447996 1065 ntBASIC3.9□□□□□ -1.79
LDB3O75112 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.9□□□□□ -1.79
LDB3O75112 AC027673.1-201ENST00000456245 405 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RPL7AP28-201ENST00000464513 571 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AP000893.1-201ENST00000474462 794 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC072039.1-201ENST00000477611 581 ntBASIC3.9□□□□□ -1.79
LDB3O75112 RPS27AP13-201ENST00000498403 237 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC104685.1-201ENST00000502445 371 ntBASIC3.9□□□□□ -1.79
LDB3O75112 AC093824.1-201ENST00000508796 343 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms