Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 AL445264.1-201ENST00000621719 171 ntBASIC3.83□□□□□ -1.8
ZIC3O60481 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.83□□□□□ -1.8
ZIC3O60481 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZIC3O60481 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
ZIC3O60481 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZIC3O60481 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZIC3O60481 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC091046.3-201ENST00000631455 1574 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC067945.1-201ENST00000342609 618 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC025750.1-201ENST00000399891 379 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AL031679.1-201ENST00000400616 525 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC109780.2-201ENST00000413467 845 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 RPS7P13-201ENST00000413955 498 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 CYCSP10-201ENST00000417973 294 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 RPS24P1-201ENST00000438550 371 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC005297.2-201ENST00000450430 606 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 BX322784.1-201ENST00000455793 1077 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC005008.1-201ENST00000456151 612 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 RPL5P30-201ENST00000465511 891 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 RPS27AP13-201ENST00000498403 237 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 BNIP3P41-201ENST00000503774 571 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 RNA5SP360-201ENST00000516555 118 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC008694.2-201ENST00000517591 306 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 MRPL49P2-201ENST00000521066 465 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 AP003033.1-201ENST00000527244 415 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 PTP4A1P6-201ENST00000531034 478 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC013828.2-201ENST00000532487 235 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZIC3O60481 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
ZIC3O60481 AGGF1P4-201ENST00000568249 801 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 MIR544B-201ENST00000582372 78 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 MIR3611-201ENST00000584484 83 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC083760.1-201ENST00000589621 670 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 BNIP3P23-201ENST00000599655 511 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 BCRP9-201ENST00000605312 388 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 AP000254.1-201ENST00000609934 520 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 LINC00901.1-201ENST00000617252 152 ntBASIC3.82□□□□□ -1.8
ZIC3O60481 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZIC3O60481 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
ZIC3O60481 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZIC3O60481 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZIC3O60481 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ZIC3O60481 AC074029.4-201ENST00000624796 1859 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 AL359893.1-201ENST00000447628 1580 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
ZIC3O60481 AL356473.1-201ENST00000406203 1408 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.81□□□□□ -1.8
ZIC3O60481 OR5H15-201ENST00000383696 930 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 SNORA70C-201ENST00000384538 135 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 DEFB108C-201ENST00000400154 252 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC136624.1-201ENST00000400791 413 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 MTCYBP36-201ENST00000404146 440 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 MIR1305-201ENST00000408300 86 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZIC3O60481 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.81□□□□□ -1.8
ZIC3O60481 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.81□□□□□ -1.8
ZIC3O60481 MTCO3P41-201ENST00000414801 328 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AC012065.2-201ENST00000421295 375 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 AL445669.1-201ENST00000426743 755 ntBASIC3.81□□□□□ -1.8
ZIC3O60481 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.81□□□□□ -1.8
ZIC3O60481 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.81□□□□□ -1.8
ZIC3O60481 RPL37P21-201ENST00000435890 276 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms