Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC128687.1-201ENST00000605304 619 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 ARF4P1-201ENST00000605447 541 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AC106052.1-201ENST00000608029 497 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AC023158.2-201ENST00000614876 543 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AC092650.2-201ENST00000619984 902 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AL732618.1-201ENST00000623251 301 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 AC120349.2-201ENST00000625002 298 ntBASIC3.82□□□□□ -1.8
CCDC188H7C350 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC188H7C350 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
CCDC188H7C350 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC188H7C350 RLIMP1-201ENST00000339626 1680 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC188H7C350 RIOK3P1-201ENST00000418778 1528 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AC068647.1-201ENST00000489539 2265 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC007685.1-201ENST00000329806 452 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RNA5SP258-201ENST00000362750 119 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AC068538.1-201ENST00000376856 336 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RNU2-15P-201ENST00000410692 191 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC188H7C350 MTCO3P12-201ENST00000416718 547 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL356095.1-201ENST00000417217 199 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RPL7P53-201ENST00000421245 739 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL513175.2-201ENST00000422071 443 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 RPL7P44-201ENST00000424827 742 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL050321.1-201ENST00000432363 400 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC188H7C350 MTCYBP11-201ENST00000447254 1109 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 NUTF2P3-201ENST00000448540 384 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RPL5P24-201ENST00000463742 885 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RPL23AP14-201ENST00000468281 468 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AC092451.1-201ENST00000480211 153 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RPL23AP55-201ENST00000498163 452 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AC020893.1-201ENST00000502452 580 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC006390.1-201ENST00000508068 283 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC188H7C350 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC024224.1-201ENST00000538284 609 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC188H7C350 LARP7P2-201ENST00000575306 125 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 MAGOH2P-202ENST00000584384 429 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 BNIP3P26-201ENST00000600827 554 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC015726.1-201ENST00000602353 681 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 BNIP3P11-201ENST00000603878 563 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC008121.2-201ENST00000614647 523 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC013470.4-201ENST00000619978 986 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC188H7C350 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC090897.3-201ENST00000636973 1157 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 AP000553.6-201ENST00000641242 118 ntBASIC3.81□□□□□ -1.8
CCDC188H7C350 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC188H7C350 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC188H7C350 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC188H7C350 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC188H7C350 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC188H7C350 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC188H7C350 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCDC188H7C350 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCDC188H7C350 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC188H7C350 RNU6-560P-201ENST00000364007 108 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 SNORA51.2-201ENST00000364595 132 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 ARF4P3-201ENST00000397387 509 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 U3.39-201ENST00000408569 239 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RNA5SP80-201ENST00000410475 111 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AL356320.2-201ENST00000417263 507 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RPL17P36-201ENST00000420302 549 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 MTND2P9-201ENST00000422293 931 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RPL31P12-201ENST00000422587 358 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RPL21P66-201ENST00000426566 466 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC073143.1-201ENST00000436316 395 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC188H7C350 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC010618.1-201ENST00000469924 477 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 RPS15AP17-201ENST00000470598 390 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC188H7C350 RPS4XP15-201ENST00000489210 795 ntBASIC3.8□□□□□ -1.8
CCDC188H7C350 AC134050.1-201ENST00000495088 933 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms