Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 AC091965.4-201ENST00000607691 587 ntBASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 AC010678.1-201ENST00000614118 713 ntBASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC187A0A096LP49 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 OR10J6P-201ENST00000289731 930 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 Y_RNA.303-201ENST00000364998 94 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 SNORA48.7-201ENST00000391302 135 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 DHFRP6-201ENST00000401776 268 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 MIR320C1-201ENST00000408566 88 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 RPL17P12-201ENST00000413391 526 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 TPMTP2-201ENST00000414372 726 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 FNDC3CP-201ENST00000420795 1155 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 EIF1P1-201ENST00000421436 341 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 RPS3AP54-201ENST00000435535 734 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 USP9YP29-201ENST00000445112 563 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AL592447.1-201ENST00000447592 540 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 BTF3P6-201ENST00000448054 499 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 FGF7P6-202ENST00000451282 293 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 RPL5P32-201ENST00000454085 879 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 DNAJC19P1-201ENST00000455312 319 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 CFTRP1-201ENST00000456646 183 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 RPL37P6-202ENST00000464216 403 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC087385.1-201ENST00000475062 312 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 POU5F1P7-201ENST00000508759 541 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 PARP4P3-201ENST00000510265 317 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AL139174.1-201ENST00000531489 886 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 CYCSP29-201ENST00000533731 318 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC016957.1-201ENST00000534895 309 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC136619.2-201ENST00000563361 631 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC090186.1-201ENST00000605991 572 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AP003117.2-201ENST00000606010 545 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AP001330.5-201ENST00000607176 411 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AL023881.1-201ENST00000621088 301 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AL161637.1-201ENST00000622380 412 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AL356121.2-201ENST00000624715 780 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 AC006065.6-201ENST00000625201 545 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 MIR6715B-201ENST00000637172 77 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 GDI2P1-201ENST00000429312 1336 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 MTND4P23-201ENST00000447723 1363 ntBASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC187A0A096LP49 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 AC126323.6-202ENST00000568092 3511 ntBASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC187A0A096LP49 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 AC074029.4-201ENST00000624796 1859 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 RNU5F-6P-201ENST00000362979 116 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 RNU6-797P-201ENST00000363101 109 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 RNA5SP366-201ENST00000365454 123 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 Y_RNA.390-201ENST00000383932 102 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 SNORA37-201ENST00000384504 129 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 BTBD10P2-201ENST00000404779 676 ntBASIC4.33□□□□□ -1.72
CCDC187A0A096LP49 RPS3AP24-201ENST00000407896 734 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms