Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 HMGN2P31-201ENST00000432430 273 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 OR2B8P-201ENST00000432841 938 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC004865.1-201ENST00000442276 1003 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 NPM1P49-201ENST00000448027 714 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC097262.1-201ENST00000452559 548 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RNU7-140P-201ENST00000459546 60 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC146507.1-201ENST00000468335 354 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC005351.1-201ENST00000511152 786 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RPL7L1P13-201ENST00000511702 739 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RN7SKP157-201ENST00000516174 282 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RNU4-60P-201ENST00000517239 135 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 SERPINE4P-201ENST00000554978 281 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 MTCO1P40-201ENST00000574371 625 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC010928.3-201ENST00000587712 541 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC008687.2-201ENST00000597865 520 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC005156.1-201ENST00000613371 573 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AL121594.5-201ENST00000631724 573 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AL590396.4-201ENST00000636779 956 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC006927.2-201ENST00000639256 389 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AL157700.1-201ENST00000561973 1432 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 AL645937.1-201ENST00000641739 1652 ntBASIC3.08□□□□□ -1.92
TRAPPC4Q9Y296 MTND5P3-201ENST00000438536 1800 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU5B-1-201ENST00000363286 116 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU1-85P-201ENST00000364127 164 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU6-353P-201ENST00000364266 108 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU6-549P-201ENST00000384433 107 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 SNORD17-201ENST00000390930 237 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU6-1176P-201ENST00000390955 107 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU6-272P-201ENST00000411028 104 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RAB11AP1-201ENST00000442978 646 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC239367.2-201ENST00000447309 705 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC008264.1-201ENST00000447612 367 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RPL23AP15-201ENST00000450202 459 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC112198.1-201ENST00000505369 1220 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC118282.1-201ENST00000506408 765 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC119751.1-201ENST00000513357 765 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 HIGD1AP6-201ENST00000521833 279 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC104115.2-201ENST00000523026 687 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 OR4R3P-201ENST00000525084 838 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC006518.2-201ENST00000542513 940 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC004217.3-201ENST00000551552 878 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 CENPUP2-201ENST00000555897 1186 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC023825.1-201ENST00000566704 1030 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC010735.1-201ENST00000567305 1026 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC090666.1-201ENST00000578241 445 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC008507.2-201ENST00000588402 1176 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AC068620.3-201ENST00000602749 560 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 AP004247.3-201ENST00000608682 624 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
TRAPPC4Q9Y296 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms