Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 AL445435.1-201ENST00000604232 665 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 BNIP3P31-201ENST00000604515 566 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 AP002802.2-201ENST00000605877 235 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 SNORA62.6-201ENST00000606322 83 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 RNU6-1192P-201ENST00000612197 107 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 RNU6-489P-201ENST00000618289 107 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 AL138955.1-201ENST00000622881 1040 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 AC091953.5-201ENST00000622919 233 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 AC106858.1-201ENST00000637497 429 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 MIR7153-201ENST00000637758 57 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF6Q9Y252 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF6Q9Y252 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF6Q9Y252 SAGE4P-201ENST00000442271 3381 ntBASIC3.4□□□□□ -1.87
RNF6Q9Y252 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF6Q9Y252 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF6Q9Y252 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 MTCO1P12-201ENST00000414273 1543 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 HMGB1P5-201ENST00000255320 642 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 RNA5SP72-201ENST00000364442 117 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 RNU6-335P-201ENST00000364563 113 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 MIR183-201ENST00000384958 110 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL138880.1-201ENST00000405824 642 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 HMGB3P20-201ENST00000417997 600 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC027644.1-201ENST00000419595 298 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC006989.1-201ENST00000427212 131 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 CYCSP43-201ENST00000438233 310 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC092393.1-201ENST00000439625 742 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 COX6CP18-201ENST00000448769 222 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC104978.1-201ENST00000449387 391 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC006480.1-201ENST00000449887 378 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 snoU13.24-201ENST00000458998 104 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 RPL6P9-201ENST00000466502 859 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC106707.2-201ENST00000484182 374 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 RN7SKP18-201ENST00000516005 275 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 RNA5SP164-201ENST00000516533 110 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 ZNF705CP-201ENST00000530515 889 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 PDCL2P2-201ENST00000533651 189 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC087897.1-201ENST00000550134 156 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC006960.3-201ENST00000561845 705 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 MIR5047-201ENST00000579212 100 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC006116.7-201ENST00000590141 756 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 DNAJC19P3-201ENST00000594491 331 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AC092354.2-201ENST00000607786 514 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF6Q9Y252 AL512506.2-201ENST00000624472 458 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 ZNF663P-202ENST00000641770 1131 ntBASIC3.39□□□□□ -1.87
RNF6Q9Y252 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF6Q9Y252 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF6Q9Y252 RNA5SP235-201ENST00000365411 114 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 SNORD6-201ENST00000365444 73 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 SNORA9-201ENST00000384215 133 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 RNU6-339P-201ENST00000384310 107 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 MIR483-201ENST00000385070 76 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RNF6Q9Y252 Y_RNA.578-201ENST00000390903 88 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
RNF6Q9Y252 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms