Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.54□□□□□ -2
CHD7Q9P2D1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.53□□□□□ -2
CHD7Q9P2D1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 GSTA9P-201ENST00000406231 611 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 AL121882.1-201ENST00000422893 417 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 ACTR6P1-201ENST00000514311 1104 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.53□□□□□ -2
CHD7Q9P2D1 MIR6873-201ENST00000622788 63 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHD7Q9P2D1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CHD7Q9P2D1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
CHD7Q9P2D1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
CHD7Q9P2D1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHD7Q9P2D1 SNORA26.9-201ENST00000391322 122 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 AC010881.1-201ENST00000433830 235 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.53□□□□□ -2
CHD7Q9P2D1 AC091917.2-201ENST00000505002 744 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.53□□□□□ -2
CHD7Q9P2D1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.53□□□□□ -2
CHD7Q9P2D1 OR4K7P-201ENST00000580232 945 ntBASIC2.53□□□□□ -2
CHD7Q9P2D1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
CHD7Q9P2D1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.53□□□□□ -2
CHD7Q9P2D1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.53□□□□□ -2
CHD7Q9P2D1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2.01
CHD7Q9P2D1 MTND5P19-201ENST00000424872 1794 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AL365396.1-201ENST00000430854 671 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC022882.1-201ENST00000532142 501 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC023813.4-201ENST00000607580 580 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 OR11H5P-202ENST00000641612 1325 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 RPL31P12-201ENST00000422587 358 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC093278.1-201ENST00000494700 600 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AL359893.1-201ENST00000447628 1580 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.52□□□□□ -2.01
CHD7Q9P2D1 GTF2H2B-203ENST00000508065 1432 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 MTND5P28-201ENST00000438005 1594 ntBASIC2.52□□□□□ -2.01
CHD7Q9P2D1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC080128.1-201ENST00000474389 1917 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 RNU6-805P-201ENST00000365643 106 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 DYNLL1P6-201ENST00000503440 264 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC074029.1-201ENST00000552531 1044 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC135628.1-201ENST00000568867 534 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 RPL9P7-201ENST00000330965 580 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 MIR423-201ENST00000362201 94 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AL583834.1-201ENST00000406943 343 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 Z82209.1-201ENST00000422141 2135 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AL590399.6-201ENST00000446396 307 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 VN1R17P-201ENST00000472048 1090 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AP000857.1-201ENST00000532151 543 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 MIR4781-201ENST00000585250 76 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 AC103710.2-201ENST00000609912 942 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.51□□□□□ -2.01
CHD7Q9P2D1 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHD7Q9P2D1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CHD7Q9P2D1 Y_RNA.540-201ENST00000384638 111 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHD7Q9P2D1 RNU2-2P-201ENST00000410396 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.5□□□□□ -2.01
CHD7Q9P2D1 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.5□□□□□ -2.01
CHD7Q9P2D1 AC100870.1-201ENST00000522035 505 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.15-201ENST00000611544 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.16-201ENST00000613119 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.12-201ENST00000613778 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.20-201ENST00000613956 192 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.9-201ENST00000615427 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.11-201ENST00000616345 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.2-201ENST00000616535 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.3-201ENST00000617785 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 U2.19-201ENST00000618602 191 ntBASIC2.5□□□□□ -2.01
CHD7Q9P2D1 RNU2-1-201ENST00000618664 191 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms