Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MIR3653-201ENST00000625572 110 ntBASIC4.58□□□□□ -1.68
VPS45Q9NRW7 AC090582.1-201ENST00000636321 199 ntBASIC4.58□□□□□ -1.68
VPS45Q9NRW7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS45Q9NRW7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS45Q9NRW7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS45Q9NRW7 AC139769.1-204ENST00000472297 1931 ntBASIC4.58□□□□□ -1.68
VPS45Q9NRW7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS45Q9NRW7 AC027290.2-201ENST00000623210 18662 ntBASIC4.58□□□□□ -1.68
VPS45Q9NRW7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS45Q9NRW7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MTND4P26-201ENST00000415971 1359 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MTND4P5-201ENST00000435821 1374 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 NXPH1-205ENST00000602349 1953 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 Y_RNA.302-201ENST00000364997 102 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 RNA5SP366-201ENST00000365454 123 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MIR659-201ENST00000384963 97 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 RPL23AP29-201ENST00000397284 453 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 EIF5P1-201ENST00000400019 1231 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AL022722.2-201ENST00000402519 180 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AL031779.1-201ENST00000415663 330 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MTCYBP38-201ENST00000417160 1123 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 DLGAP5P1-201ENST00000430307 464 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 CKS1BP5-201ENST00000434172 273 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 RPL23AP93-201ENST00000440847 484 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 COX6CP2-201ENST00000444980 225 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 NDUFS5P3-201ENST00000450668 321 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC012671.1-201ENST00000451912 203 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 KATNBL1P6-201ENST00000453433 915 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 USP9YP10-201ENST00000454868 628 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 RN7SL98P-201ENST00000462271 300 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 RPS26P28-201ENST00000470806 348 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC114981.1-201ENST00000503897 678 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 USP9YP5-201ENST00000511770 630 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC091965.2-201ENST00000512324 613 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MTCYBP20-201ENST00000524239 1129 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 HSPE1P3-201ENST00000559254 309 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC090181.2-201ENST00000602975 672 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC083899.3-201ENST00000603413 594 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 U73479.1-201ENST00000618062 168 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC026585.1-201ENST00000619582 524 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AC092656.1-203ENST00000624134 423 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MIR492-201ENST00000638676 116 ntBASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS45Q9NRW7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RNU1-63P-201ENST00000383902 164 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RNU6-339P-201ENST00000384310 107 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RNU1-13P-201ENST00000384499 162 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 Y_RNA.553-201ENST00000384670 102 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 Y_RNA.559-201ENST00000384686 107 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AL450338.1-201ENST00000407987 512 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RNA5SP317-201ENST00000410176 116 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RN7SKP167-201ENST00000411047 285 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RNA5SP311-201ENST00000411290 116 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 TMSB10P2-201ENST00000416049 131 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AL049610.1-201ENST00000423374 372 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RPL23AP74-201ENST00000437246 471 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 MTND4P6-201ENST00000438297 472 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 RPL23AP43-201ENST00000446445 471 ntBASIC4.56□□□□□ -1.68
VPS45Q9NRW7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms