Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC018714.1-201ENST00000605028 208 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL365503.1-201ENST00000605247 905 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC015813.4-201ENST00000610469 179 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AC004223.4-201ENST00000612426 332 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL121873.1-201ENST00000616013 524 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL596245.1-201ENST00000618994 362 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL713922.2-201ENST00000619384 716 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AF246928.1-201ENST00000623768 87 ntBASIC4.04□□□□□ -1.76
BRF2Q9HAW0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
BRF2Q9HAW0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 MIR448-201ENST00000362131 111 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RNA5SP447-201ENST00000363749 119 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 SNORA51.2-201ENST00000364595 132 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RNU6-723P-201ENST00000383973 107 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 Y_RNA.560-201ENST00000384689 102 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RNA5SP36-201ENST00000410197 133 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AL160275.2-201ENST00000412010 394 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC245052.5-201ENST00000416320 649 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 MTND1P20-201ENST00000430341 950 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RPL23AP46-201ENST00000438548 490 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 ELOCP8-201ENST00000439309 332 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 ELOCP15-201ENST00000442090 332 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 OR6C5P-201ENST00000452388 923 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 BTF3P5-201ENST00000457252 467 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RPL36AP13-201ENST00000457490 317 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 HMGB1P25-201ENST00000468402 607 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 TXNP6-201ENST00000510190 310 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC010486.3-201ENST00000511602 785 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RNU6-759P-201ENST00000516740 103 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 OR6C7P-201ENST00000547875 934 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AL121603.1-201ENST00000553815 142 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 Z99497.2-201ENST00000603634 310 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC018755.4-201ENST00000619715 454 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 RMST_9.1-201ENST00000619945 193 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC091931.1-201ENST00000623488 728 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 CU459211.1-201ENST00000635667 749 ntBASIC4.03□□□□□ -1.76
BRF2Q9HAW0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
BRF2Q9HAW0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 Y_RNA.302-201ENST00000364997 102 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 MIR513A2-201ENST00000385249 127 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL138880.1-201ENST00000405824 642 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 RNU6-712P-201ENST00000410558 100 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 RAD23BP2-201ENST00000416003 1207 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL137014.1-201ENST00000420490 1226 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC007742.1-201ENST00000425789 329 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 MTND4LP10-201ENST00000435146 291 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ELOCP26-201ENST00000436067 329 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL831737.1-201ENST00000441288 271 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms