Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
KRTAP9-3Q9BYQ3 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 THAP12P5-201ENST00000405864 2275 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC245505.2-201ENST00000553572 3055 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ARHGAP32-206ENST00000527272 5289 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 PPIAP24-201ENST00000328558 471 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-1017P-201ENST00000363613 106 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-105P-201ENST00000363909 104 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-793P-201ENST00000384233 104 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 CYB5AP4-201ENST00000396692 399 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPL21P67-201ENST00000402896 478 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL603650.1-201ENST00000412680 240 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC245028.1-201ENST00000423259 256 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPS29P14-201ENST00000431518 171 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL590128.1-201ENST00000433407 286 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL645939.3-201ENST00000435408 225 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SDHCP3-201ENST00000445371 506 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPL23AP28-201ENST00000448062 470 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 snoU13.6-201ENST00000458785 104 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 RN7SL552P-201ENST00000462094 276 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC083806.1-201ENST00000468934 316 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 PPIAP19-201ENST00000486414 492 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC022296.2-201ENST00000512424 202 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC140063.1-201ENST00000541343 259 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC023827.2-201ENST00000566880 1061 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 MIR4502-201ENST00000580432 81 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC020914.7-201ENST00000594477 545 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SMIM12P1-201ENST00000603004 274 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC091133.5-201ENST00000603088 301 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AP001052.1-201ENST00000626421 99 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORA16A-202ENST00000628458 135 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC241585.2-209ENST00000638217 143 ntBASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 SLC24A1-211ENST00000544319 3169 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
KRTAP9-3Q9BYQ3 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms