Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC087441.2-201ENST00000529141 262 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 LARP7P2-201ENST00000575306 125 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC068790.3-201ENST00000602988 553 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC020910.3-201ENST00000603701 874 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL031666.3-201ENST00000609320 1006 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AC093799.2-201ENST00000610062 578 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL357559.1-201ENST00000622228 274 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 AL159972.1-201ENST00000625150 448 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL25A1Q9BXS0 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 MIR335-201ENST00000362173 94 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 RNU6-641P-201ENST00000384006 107 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 Y_RNA.577-201ENST00000384794 101 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 RNA5SP339-201ENST00000390987 122 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AL359643.1-201ENST00000404109 423 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AL583834.1-201ENST00000406943 343 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 NMD3P2-201ENST00000421815 761 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 KRTAP3-4P-201ENST00000430780 280 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 PPIAP21-201ENST00000464473 501 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC097486.1-201ENST00000515331 210 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC009643.1-201ENST00000532030 391 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC091516.1-201ENST00000549191 703 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC009120.3-201ENST00000563335 499 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 MIR6780A-201ENST00000615089 68 ntBASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.91□□□□□ -1.46
COL25A1Q9BXS0 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 AC008669.1-201ENST00000565823 2178 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 Y_RNA.83-201ENST00000363005 113 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RNU6-984P-201ENST00000363236 109 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RNU6-682P-201ENST00000363843 106 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 RNU5A-8P-201ENST00000364102 114 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 Y_RNA.269-201ENST00000364685 89 ntBASIC5.9□□□□□ -1.46
COL25A1Q9BXS0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms