Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL353705.1-201ENST00000433468 480 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 NANOGP2-201ENST00000435391 727 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 MTND1P26-201ENST00000440488 538 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 HMGB3P6-201ENST00000444896 598 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC112492.1-201ENST00000449607 712 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 snoU13.22-201ENST00000459428 104 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 PRDX3P4-201ENST00000470828 747 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC104027.1-201ENST00000521887 300 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 NIFKP8-201ENST00000560500 874 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC090751.1-201ENST00000566966 267 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC022022.2-201ENST00000602989 360 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC002487.1-201ENST00000604565 994 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AL392112.1-201ENST00000605115 829 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 YPEL5P2-201ENST00000605553 359 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AL583856.2-201ENST00000606298 543 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC096577.2-201ENST00000611455 153 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 AC017104.5-201ENST00000637647 639 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 SEPT7P7-201ENST00000420492 1301 ntBASIC4.68□□□□□ -1.66
SIN3AQ96ST3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.68□□□□□ -1.66
SIN3AQ96ST3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 RNU6-984P-201ENST00000363236 109 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AL136310.1-201ENST00000404926 654 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 HIGD1AP15-201ENST00000416198 280 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AL513175.2-201ENST00000422071 443 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 CST9LP2-201ENST00000437612 320 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 CR769776.1-201ENST00000441254 787 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 Z73417.1-201ENST00000447373 778 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC004022.1-201ENST00000447766 1066 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AL162388.1-201ENST00000450912 352 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AP001636.2-201ENST00000525517 696 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC139103.1-201ENST00000534696 1030 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 HMGB3P26-201ENST00000560051 582 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 MIR5680-201ENST00000577577 84 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 BNIP3P33-201ENST00000598912 569 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 CLIC4P2-201ENST00000601934 717 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 MTND3P19-201ENST00000603825 345 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 AC010200.2-201ENST00000605098 235 ntBASIC4.67□□□□□ -1.66
SIN3AQ96ST3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SIN3AQ96ST3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 RNU6-575P-201ENST00000411326 105 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 RPS7P13-201ENST00000413955 498 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 KRR1P1-201ENST00000419430 803 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC093698.1-201ENST00000423843 571 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC092447.3-201ENST00000426027 686 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AL009174.1-201ENST00000426577 416 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC115115.1-201ENST00000449927 248 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 BX248409.1-201ENST00000455497 255 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 NAP1L1P3-201ENST00000462291 880 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 RN7SL601P-201ENST00000471221 293 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC108078.3-201ENST00000502633 489 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.66□□□□□ -1.66
SIN3AQ96ST3 MTND4LP24-201ENST00000572277 291 ntBASIC4.66□□□□□ -1.66
SIN3AQ96ST3 AC015688.2-201ENST00000584523 262 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms