Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC090229.1-201ENST00000590983 1609 ntBASIC3.91□□□□□ -1.78
USP47Q96K76 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP47Q96K76 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP47Q96K76 RNU1-112P-201ENST00000364401 164 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 RNU6-317P-201ENST00000384031 107 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AL138827.1-201ENST00000402666 306 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 RFESDP1-201ENST00000422350 461 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AL031663.1-201ENST00000437445 219 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 CBX1P4-201ENST00000439415 457 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AL592437.1-201ENST00000443781 492 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.9□□□□□ -1.78
USP47Q96K76 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.9□□□□□ -1.78
USP47Q96K76 AC090525.1-201ENST00000479116 478 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.9□□□□□ -1.78
USP47Q96K76 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.9□□□□□ -1.78
USP47Q96K76 RNU6-889P-201ENST00000517189 103 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.9□□□□□ -1.78
USP47Q96K76 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.9□□□□□ -1.78
USP47Q96K76 AL109741.3-201ENST00000561748 592 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 MIR5047-201ENST00000579212 100 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AC138761.3-201ENST00000579993 334 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USP47Q96K76 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.9□□□□□ -1.78
USP47Q96K76 AC096947.1-201ENST00000603233 470 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AL355816.1-201ENST00000607951 118 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AC067852.7-201ENST00000623270 535 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 AC010149.2-201ENST00000637608 315 ntBASIC3.9□□□□□ -1.78
USP47Q96K76 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.9□□□□□ -1.78
USP47Q96K76 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USP47Q96K76 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.9□□□□□ -1.78
USP47Q96K76 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP47Q96K76 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
USP47Q96K76 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP47Q96K76 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP47Q96K76 AC005183.1-201ENST00000603687 1979 ntBASIC3.9□□□□□ -1.79
USP47Q96K76 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP47Q96K76 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP47Q96K76 RNU6-185P-201ENST00000384421 107 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 RNA5SP21-201ENST00000410917 96 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 RPL7P31-201ENST00000450192 724 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.89□□□□□ -1.79
USP47Q96K76 DYNLL1P6-201ENST00000503440 264 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.89□□□□□ -1.79
USP47Q96K76 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
USP47Q96K76 RNA5SP380-201ENST00000517190 98 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.89□□□□□ -1.79
USP47Q96K76 AP003117.1-201ENST00000602771 554 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.89□□□□□ -1.79
USP47Q96K76 OR6R2P-201ENST00000609216 300 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 Z73965.1-201ENST00000623412 2297 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AL592437.2-201ENST00000421655 2434 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC244453.4-201ENST00000419150 388 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.89□□□□□ -1.79
USP47Q96K76 AC063976.3-201ENST00000426849 329 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.89□□□□□ -1.79
USP47Q96K76 HMGB1P26-201ENST00000452520 628 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC010683.1-201ENST00000473673 378 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC093770.1-201ENST00000511559 571 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 SETP12-201ENST00000514068 805 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.89□□□□□ -1.79
USP47Q96K76 AL049870.4-201ENST00000555741 486 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AL035413.2-201ENST00000604801 525 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC007619.2-201ENST00000605743 379 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 Z99129.2-201ENST00000619967 314 ntBASIC3.89□□□□□ -1.79
USP47Q96K76 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.89□□□□□ -1.79
USP47Q96K76 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.89□□□□□ -1.79
USP47Q96K76 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP47Q96K76 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
USP47Q96K76 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.88□□□□□ -1.79
USP47Q96K76 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
USP47Q96K76 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.88□□□□□ -1.79
USP47Q96K76 AL133412.1-201ENST00000380194 2992 ntBASIC3.88□□□□□ -1.79
USP47Q96K76 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
USP47Q96K76 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.88□□□□□ -1.79
USP47Q96K76 AC019097.1-201ENST00000424783 735 ntBASIC3.88□□□□□ -1.79
USP47Q96K76 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.88□□□□□ -1.79
USP47Q96K76 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.88□□□□□ -1.79
USP47Q96K76 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.88□□□□□ -1.79
USP47Q96K76 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.88□□□□□ -1.79
USP47Q96K76 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.88□□□□□ -1.79
USP47Q96K76 HPRT1P3-201ENST00000539521 576 ntBASIC3.88□□□□□ -1.79
USP47Q96K76 AP003072.4-201ENST00000624580 310 ntBASIC3.88□□□□□ -1.79
USP47Q96K76 PNPT1P2-201ENST00000456768 2050 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC104446.1-201ENST00000613728 1321 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
USP47Q96K76 AC008264.2-201ENST00000610193 3731 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP47Q96K76 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
USP47Q96K76 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP47Q96K76 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP47Q96K76 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
USP47Q96K76 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.87□□□□□ -1.79
USP47Q96K76 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
USP47Q96K76 MIR26A1-201ENST00000362205 77 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.87□□□□□ -1.79
USP47Q96K76 AL360182.1-201ENST00000397433 468 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 MIR1261-201ENST00000408659 82 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC112220.1-201ENST00000434628 355 ntBASIC3.87□□□□□ -1.79
USP47Q96K76 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms