Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VMP1Q96GC9 RPL29P14-201ENST00000495837 428 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 RPL31P61-201ENST00000496160 376 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL139099.1-201ENST00000497398 403 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 RN7SKP21-201ENST00000516503 220 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 IGKV2-38-201ENST00000517443 247 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VMP1Q96GC9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC125611.1-201ENST00000549563 229 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL133457.1-201ENST00000564251 987 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC007599.1-201ENST00000568688 1174 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 MRPS35P3-201ENST00000603189 709 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC099778.2-201ENST00000610904 211 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 CYCSP41-201ENST00000616920 296 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC068831.8-201ENST00000620171 435 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL353748.2-201ENST00000622148 471 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 LINC00561-201ENST00000565815 2738 ntBASIC3.84□□□□□ -1.8
VMP1Q96GC9 ZNF807-201ENST00000328088 1707 ntBASIC3.84□□□□□ -1.8
VMP1Q96GC9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 MAPK10-373ENST00000641983 6772 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VMP1Q96GC9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VMP1Q96GC9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VMP1Q96GC9 SPRR2C-201ENST00000290702 219 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 RNU6-173P-201ENST00000364215 104 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 RNA5SP130-201ENST00000364431 114 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VMP1Q96GC9 RNU6-298P-201ENST00000390888 96 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 RN7SKP263-201ENST00000411194 309 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 RN7SKP53-201ENST00000411337 315 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 RPL7P30-201ENST00000420888 709 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC087650.1-201ENST00000431445 468 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 SNRPEP4-201ENST00000435815 279 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC006011.1-201ENST00000442758 349 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC069528.1-202ENST00000482888 637 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC079203.1-201ENST00000487972 404 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC087808.1-201ENST00000520501 361 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AP001636.2-201ENST00000525517 696 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AL845331.3-202ENST00000562856 261 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 MIR3912-201ENST00000577566 105 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 MIR3160-1-201ENST00000577972 85 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC016877.3-201ENST00000606778 504 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 MIR7151-201ENST00000617477 60 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AL356585.4-201ENST00000623078 1229 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 AP000720.1-201ENST00000625091 483 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VMP1Q96GC9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AL645937.1-201ENST00000641739 1652 ntBASIC3.83□□□□□ -1.8
VMP1Q96GC9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.83□□□□□ -1.8
VMP1Q96GC9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VMP1Q96GC9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VMP1Q96GC9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AP005901.5-201ENST00000545779 1796 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 ZNF542P-204ENST00000482727 1305 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC107982.1-201ENST00000507171 1300 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VMP1Q96GC9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VMP1Q96GC9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 RNU6-628P-201ENST00000410675 107 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 RPF2P1-201ENST00000424137 906 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 OR4C10P-201ENST00000434991 931 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC092427.1-201ENST00000439177 601 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AL359073.1-201ENST00000448036 403 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AL589880.1-201ENST00000448271 287 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 RPL12P26-201ENST00000452430 487 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 Z82190.1-201ENST00000454534 490 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC087312.1-201ENST00000471411 480 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AL132838.2-201ENST00000492041 314 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC093824.1-201ENST00000508796 343 ntBASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.82□□□□□ -1.8
VMP1Q96GC9 AC093331.1-201ENST00000521474 169 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms