Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 AL359195.2-201ENST00000623657 4412 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 MIR412-201ENST00000362142 91 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-37P-201ENST00000362692 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-11P-201ENST00000364234 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 Y_RNA.233-201ENST00000364407 101 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-7-201ENST00000364784 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-8-201ENST00000365467 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-25P-201ENST00000383873 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-1-201ENST00000383898 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 Y_RNA.405-201ENST00000383979 100 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-76P-201ENST00000384060 104 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-36P-201ENST00000384172 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 Y_RNA.451-201ENST00000384200 100 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-4P-201ENST00000384205 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-5P-201ENST00000384238 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-3P-201ENST00000384314 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-937P-201ENST00000384325 106 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-16P-201ENST00000384385 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-15P-201ENST00000384534 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 Y_RNA.524-201ENST00000384564 100 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-2-201ENST00000384627 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-29P-201ENST00000384637 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 Y_RNA.561-201ENST00000384694 100 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-9-201ENST00000384776 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 RN7SKP148-201ENST00000410179 275 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 SNORA35.1-201ENST00000458908 128 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC087588.1-201ENST00000462203 316 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 AL591122.1-201ENST00000487348 492 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC007686.1-201ENST00000488511 463 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 TRAPPC2P7-201ENST00000509650 231 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 Y_RNA.679-201ENST00000516416 91 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU2-31P-201ENST00000516954 155 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RN7SKP147-201ENST00000517154 244 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 IGHVII-62-1-201ENST00000519283 235 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC008489.1-201ENST00000524271 483 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 HMGN2P47-201ENST00000559378 272 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 MIR4685-201ENST00000578185 69 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 RNU6-6P-201ENST00000606623 107 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 AL355834.1-201ENST00000556602 3965 ntBASIC7.24□□□□□ -1.25
RNF25Q96BH1 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.24□□□□□ -1.25
RNF25Q96BH1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RNF25Q96BH1 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF25Q96BH1 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF25Q96BH1 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF25Q96BH1 AL591848.4-201ENST00000567832 3472 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC129502.1-201ENST00000623261 1654 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RNF25Q96BH1 RNU6-47P-201ENST00000383866 107 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC134879.1-201ENST00000426062 394 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AL592045.1-201ENST00000429867 352 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 ATP5LP4-201ENST00000434169 307 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC093414.1-201ENST00000434712 514 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC108161.1-201ENST00000461060 402 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC087477.1-201ENST00000465747 340 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC012158.1-204ENST00000483430 465 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC079944.1-201ENST00000485426 495 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC022493.1-201ENST00000492984 337 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 RNU6-612P-201ENST00000516909 102 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.23□□□□□ -1.25
RNF25Q96BH1 AP001803.1-201ENST00000525668 147 ntBASIC7.23□□□□□ -1.25
RNF25Q96BH1 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms