Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PSPHP1-201ENST00000450062 261 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 AL590365.1-201ENST00000450788 243 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 HIGD1AP8-201ENST00000453927 274 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 RPL31P58-201ENST00000469001 379 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC108078.1-201ENST00000508073 725 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 NDUFB4P2-201ENST00000509515 391 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC008549.1-201ENST00000512900 643 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 RNU1-6P-201ENST00000516290 144 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.18□□□□□ -1.58
ERCC4Q92889 IGLV3-26-201ENST00000520756 302 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC4Q92889 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.18□□□□□ -1.58
ERCC4Q92889 AC024940.4-201ENST00000605507 246 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 AC092954.2-201ENST00000609103 430 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 AC008250.2-201ENST00000615261 205 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 AC072046.2-201ENST00000618366 268 ntBASIC5.18□□□□□ -1.58
ERCC4Q92889 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
ERCC4Q92889 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
ERCC4Q92889 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC087190.4-201ENST00000574616 8334 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERCC4Q92889 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
ERCC4Q92889 RNU1-108P-201ENST00000362556 161 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 RNU6-533P-201ENST00000384144 107 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 MIR921-201ENST00000401133 56 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 RPL12P34-201ENST00000424532 479 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC007742.1-201ENST00000425789 329 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL590762.4-201ENST00000425885 253 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 ELOCP26-201ENST00000436067 329 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AL121601.2-201ENST00000438019 707 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 MTND5P14-201ENST00000441481 1267 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL671855.1-201ENST00000446875 1203 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 SCARNA10-201ENST00000459255 330 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC026410.2-201ENST00000460281 156 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC010301.1-201ENST00000473936 355 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 ACTR3P3-201ENST00000480448 893 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 TMEM251P1-201ENST00000503717 318 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 SNORA18.6-201ENST00000516792 115 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 HSPA8P13-201ENST00000523715 472 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 RN7SL652P-201ENST00000577769 300 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC091135.1-201ENST00000585943 307 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AC011487.3-201ENST00000593607 453 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL049539.1-201ENST00000611964 459 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL592295.2-201ENST00000612578 206 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.17□□□□□ -1.58
ERCC4Q92889 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
ERCC4Q92889 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 CR848007.1-201ENST00000442354 1699 ntBASIC5.17□□□□□ -1.58
ERCC4Q92889 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.17□□□□□ -1.58
ERCC4Q92889 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
ERCC4Q92889 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ERCC4Q92889 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ERCC4Q92889 AP002907.1-201ENST00000606361 1430 ntBASIC5.16□□□□□ -1.58
ERCC4Q92889 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.16□□□□□ -1.58
ERCC4Q92889 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms