Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RPL21P129-201ENST00000491732 478 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 COL6A4P2-205ENST00000509855 506 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 RNA5SP217-201ENST00000515959 91 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 RN7SKP244-201ENST00000516513 307 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AC087272.1-201ENST00000523624 533 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AP000619.3-201ENST00000535634 1127 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 RPL21P12-201ENST00000559810 515 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 MIR4429-201ENST00000580105 73 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 MIR4444-1-201ENST00000581696 74 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 MIR4444-2-201ENST00000584390 74 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 ELOCP35-201ENST00000604289 336 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL355578.1-201ENST00000607405 1328 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AL591516.1-201ENST00000611326 274 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 AP003400.6-201ENST00000624698 740 ntBASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC65Q8IXS2 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 API5P2-201ENST00000397055 1498 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 RNU6-600P-201ENST00000362524 99 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 RNU1-85P-201ENST00000364127 164 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 MIR670-201ENST00000390142 98 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 RPL32P35-201ENST00000415214 394 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC006960.1-201ENST00000419980 153 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC044797.1-201ENST00000445744 679 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC125238.1-201ENST00000448842 249 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 SSXP4-201ENST00000451349 245 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 DNAJC19P8-201ENST00000452887 259 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC008280.2-201ENST00000455473 307 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 NCOR1P1-202ENST00000486162 291 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 WBP1LP4-201ENST00000505043 344 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 RNU1-143P-201ENST00000516296 146 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 MIR2682-201ENST00000580305 110 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 U1.23-201ENST00000610293 146 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AL354976.1-201ENST00000613843 387 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 RNU1-68P-201ENST00000615382 146 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC018926.3-201ENST00000618841 406 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC006213.5-201ENST00000619673 288 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 U1.39-201ENST00000621562 146 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 OR8B1P-202ENST00000641132 1178 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC116096.1-201ENST00000566804 2314 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 SEC63P2-201ENST00000503863 1939 ntBASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC65Q8IXS2 AC002546.1-201ENST00000588041 2504 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 NSRP1P1-201ENST00000444067 1693 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 SNORA71.3-201ENST00000362582 128 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 U3.11-201ENST00000364476 212 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 SNORA48.7-201ENST00000391302 135 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 RPL6P5-201ENST00000445678 828 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 ELOCP23-201ENST00000452014 332 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AL035407.2-201ENST00000454090 378 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 RPS4XP10-201ENST00000465034 731 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 RPL21P47-201ENST00000483696 477 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 MIR1254-2-201ENST00000579553 63 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 ZNF415P1-201ENST00000582279 1166 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 AC096586.1-201ENST00000610267 561 ntBASIC3.55□□□□□ -1.84
CCDC65Q8IXS2 uc_338.25-201ENST00000613756 156 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms