Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL159987.2-201ENST00000432754 307 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 RPL21P23-201ENST00000446654 460 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SCXQ7RTU7 RPS23P3-201ENST00000470993 430 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 OR5H5P-201ENST00000503164 928 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC021146.5-201ENST00000503544 545 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 PHBP14-201ENST00000512887 367 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 RNU6-362P-201ENST00000516736 90 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 RN7SKP60-201ENST00000516985 239 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 SNORA70.24-201ENST00000517233 118 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC090877.1-201ENST00000561418 344 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC020914.6-201ENST00000594327 272 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 BNIP3P4-201ENST00000604946 565 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC008962.1-201ENST00000605729 304 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC004832.5-201ENST00000608677 401 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC013468.1-201ENST00000608680 598 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC003001.2-201ENST00000616294 831 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC091953.5-201ENST00000622919 233 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC090897.3-201ENST00000636973 1157 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC008432.1-201ENST00000615912 1320 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 ZNF807-201ENST00000328088 1707 ntBASIC2.33□□□□□ -2.04
SCXQ7RTU7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SCXQ7RTU7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
SCXQ7RTU7 AC007823.1-201ENST00000569932 1566 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SCXQ7RTU7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 SNORD9-201ENST00000362566 104 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RNA5SP50-201ENST00000363731 107 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 RNU6-444P-201ENST00000383988 108 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RNVU1-14-201ENST00000384770 164 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RPL17P50-201ENST00000396131 546 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL136116.1-201ENST00000403591 381 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RNU6-77P-201ENST00000410554 91 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RPS7P15-201ENST00000415804 584 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC017079.2-201ENST00000416102 485 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AP000907.1-201ENST00000428428 510 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 CYCSP4-201ENST00000429682 331 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 MOB1AP1-201ENST00000430903 535 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC092641.1-201ENST00000440229 772 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 MTCO3P43-201ENST00000440974 771 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 HMGB3P8-201ENST00000449709 577 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC006480.1-201ENST00000449887 378 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC093392.2-201ENST00000450682 337 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 RPL21P8-201ENST00000465083 535 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RPS3AP50-201ENST00000487064 803 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC006483.1-201ENST00000487308 313 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RPL23AP73-201ENST00000492507 471 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 CAB39P1-201ENST00000502277 460 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC105914.1-201ENST00000511798 226 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC022690.1-201ENST00000526681 550 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 OR8K4P-201ENST00000534608 872 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC008011.1-201ENST00000545989 227 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL845331.3-202ENST00000562856 261 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 COX6CP3-201ENST00000580869 223 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AP001029.3-201ENST00000588063 596 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC016542.1-201ENST00000608259 493 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 VIS1.1-201ENST00000610517 203 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 RMST_10.1-201ENST00000616309 154 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 MIR7975-201ENST00000619350 68 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC006213.5-201ENST00000619673 288 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 AC097372.4-201ENST00000625025 466 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AL392088.2-201ENST00000637607 285 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AP002907.1-201ENST00000606361 1430 ntBASIC2.32□□□□□ -2.04
SCXQ7RTU7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.32□□□□□ -2.04
SCXQ7RTU7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms