Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 HMGB1P48-201ENST00000446155 598 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 SEPT7P6-201ENST00000469999 1143 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 USP9YP5-201ENST00000511770 630 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 NF1P10-201ENST00000613227 742 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 AC123768.4-201ENST00000616244 701 ntBASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
VPS13DQ5THJ4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 MTND5P6-201ENST00000422338 1798 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 USP9YP20-201ENST00000419224 558 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 PTP4A1P5-201ENST00000420305 455 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AL162388.1-201ENST00000450912 352 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 MTCO3P11-201ENST00000455103 774 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AL358913.1-201ENST00000554342 121 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC083760.1-201ENST00000589621 670 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC010338.1-201ENST00000621823 717 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AL353684.1-201ENST00000622677 1120 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC016717.2-201ENST00000609089 5141 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC116158.1-201ENST00000560231 2129 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC245291.1-201ENST00000419501 328 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC012498.1-201ENST00000424037 437 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC103975.1-201ENST00000482506 483 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 RN7SL633P-201ENST00000488974 297 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 NPM1P35-201ENST00000533043 868 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC092013.1-201ENST00000438795 332 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 RNA5SP445-201ENST00000515889 115 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 FAM60DP-201ENST00000524174 632 ntBASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.69□□□□□ -2.14
VPS13DQ5THJ4 FAM133CP-201ENST00000332869 704 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL355379.1-201ENST00000405542 640 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 CYCSP49-201ENST00000420810 319 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RPL36AP51-201ENST00000487216 318 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL136981.2-201ENST00000617319 734 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC241377.1-201ENST00000619797 406 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC066616.2-201ENST00000559334 1481 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL049610.1-201ENST00000423374 372 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC090229.1-201ENST00000590983 1609 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RPL9P7-201ENST00000330965 580 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RNU6-328P-201ENST00000390887 106 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 CYCSP45-201ENST00000402289 315 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 NANOGP5-201ENST00000424456 877 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RPL23AP74-201ENST00000437246 471 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 HMGB3P12-201ENST00000438745 556 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC107015.1-201ENST00000466902 747 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC112673.1-201ENST00000513168 575 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 ACTR6P1-201ENST00000514311 1104 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL139286.1-201ENST00000604465 483 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC092184.1-201ENST00000625042 715 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL024474.1-201ENST00000404655 591 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RPL36AP21-201ENST00000490372 323 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AL591516.1-201ENST00000611326 274 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC004696.1-201ENST00000614345 607 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 U4.3-201ENST00000621047 82 ntBASIC1.68□□□□□ -2.14
VPS13DQ5THJ4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms