Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RC3H1Q5TC82 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.84□□□□□ -1.31
RC3H1Q5TC82 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AL034549.2-201ENST00000618285 3373 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.167-201ENST00000363735 109 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 RNU1-146P-201ENST00000364015 165 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 RNU6-853P-201ENST00000364306 107 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.291-201ENST00000364886 113 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.493-201ENST00000384422 102 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.496-201ENST00000384444 101 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.555-201ENST00000384673 110 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC013442.1-201ENST00000397347 228 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 DHFRP6-201ENST00000401776 268 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 RPSAP35-201ENST00000413753 818 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC139712.2-201ENST00000424302 339 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 OR4K11P-201ENST00000431829 904 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 MTND5P15-201ENST00000434246 349 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC005019.1-201ENST00000436455 431 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC002381.1-201ENST00000447049 280 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 MTND1P17-201ENST00000448961 204 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC104563.1-201ENST00000476147 376 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC010350.1-201ENST00000504908 231 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 IGKV2D-10-201ENST00000520194 281 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC008033.2-201ENST00000542626 177 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 OR4K8P-201ENST00000578842 1048 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 MIR3672-201ENST00000584290 82 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC145207.9-201ENST00000623802 325 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 OR4F13P-202ENST00000560066 2054 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RC3H1Q5TC82 HSPA8P14-201ENST00000552265 1805 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 AC093311.1-201ENST00000506586 2021 ntBASIC6.83□□□□□ -1.32
RC3H1Q5TC82 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 MIR454-201ENST00000390180 115 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 RPL23AP17-201ENST00000401064 499 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL590139.1-201ENST00000416267 400 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 ATG3P1-201ENST00000419507 911 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 PGBD4P6-201ENST00000421501 610 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 TPT1P13-201ENST00000449760 499 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 FTH1P2-201ENST00000466086 412 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 RPL7P43-201ENST00000478876 753 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL671862.1-201ENST00000515851 349 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 RNU6-1038P-201ENST00000516516 104 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AC103843.2-201ENST00000530523 682 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 BNIP3P1-201ENST00000547295 580 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AC105224.1-201ENST00000587055 421 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 BBIP1P1-201ENST00000602999 279 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL022394.1-201ENST00000606979 292 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AL138960.1-201ENST00000613838 513 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AC092608.2-201ENST00000624427 218 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 AC121333.1-201ENST00000567488 2709 ntBASIC6.82□□□□□ -1.32
RC3H1Q5TC82 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 KPNA2P1-201ENST00000458289 1591 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms