Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
CCDC96Q2M329 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 TNPO1P3-201ENST00000436471 2662 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 RNU4-28P-201ENST00000364739 141 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 OR1L1-202ENST00000373686 1083 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 Y_RNA.493-201ENST00000384422 102 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 U8.11-201ENST00000384699 133 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 U8.12-201ENST00000384701 133 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 PTMAP2-201ENST00000397627 327 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 RNU4-22P-201ENST00000411058 166 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC027644.1-201ENST00000419595 298 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 GOT2P5-201ENST00000433995 546 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 HMGB1P16-201ENST00000447155 540 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL133547.1-201ENST00000448546 220 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 HMGB3P22-202ENST00000451823 572 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 U8.18-201ENST00000459285 133 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 snoU13.3-201ENST00000459441 104 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AP002812.1-201ENST00000495378 474 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC021146.5-201ENST00000503544 545 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 TRMT10BP1-201ENST00000519377 943 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC090888.2-201ENST00000559765 1144 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC005412.1-201ENST00000580812 1049 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL669831.4-202ENST00000590817 238 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC025588.3-201ENST00000604182 274 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 MIR92B-201ENST00000607575 96 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC004908.3-201ENST00000610248 625 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL138478.1-201ENST00000612252 832 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL354976.1-201ENST00000613843 387 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 AL392048.1-201ENST00000613946 534 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC009159.2-201ENST00000617603 606 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AC007256.1-201ENST00000392253 2765 ntBASIC4.47□□□□□ -1.69
CCDC96Q2M329 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC96Q2M329 AP001350.1-201ENST00000601906 1524 ntBASIC4.46□□□□□ -1.69
CCDC96Q2M329 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.46□□□□□ -1.69
CCDC96Q2M329 ANKRD36P1-201ENST00000344424 659 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 MIR423-201ENST00000362201 94 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 MIR199A2-201ENST00000385289 110 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 AL023807.1-201ENST00000407932 359 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 RNA5SP56-201ENST00000410277 118 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 RNU2-71P-201ENST00000411395 189 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 CRYBB2P1-203ENST00000415709 538 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 HIGD1AP15-201ENST00000416198 280 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 AC009237.2-201ENST00000421358 284 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 RPL21P66-201ENST00000426566 466 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 AL591419.1-201ENST00000427423 339 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 AC092155.2-201ENST00000454675 477 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 TRBV26-201ENST00000456572 344 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 RPL7P24-201ENST00000493052 752 ntBASIC4.46□□□□□ -1.7
CCDC96Q2M329 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC96Q2M329 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC96Q2M329 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC96Q2M329 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC96Q2M329 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC96Q2M329 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC96Q2M329 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC96Q2M329 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC96Q2M329 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC96Q2M329 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC96Q2M329 MIR670-201ENST00000390142 98 ntBASIC4.45□□□□□ -1.7
CCDC96Q2M329 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC96Q2M329 RPL22P18-201ENST00000417197 377 ntBASIC4.45□□□□□ -1.7
CCDC96Q2M329 KRR1P1-201ENST00000419430 803 ntBASIC4.45□□□□□ -1.7
CCDC96Q2M329 AL139247.1-201ENST00000422768 325 ntBASIC4.45□□□□□ -1.7
CCDC96Q2M329 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms