Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
COL16A1Q07092 RPL21P99-201ENST00000480369 423 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.7□□□□□ -1.82
COL16A1Q07092 AC108078.3-201ENST00000502633 489 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC098862.1-201ENST00000504991 413 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC016550.1-201ENST00000505348 785 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC092436.1-201ENST00000506450 503 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC114322.1-201ENST00000506771 926 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC005921.1-201ENST00000510589 286 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC022882.1-201ENST00000532142 501 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AP000867.2-201ENST00000532468 320 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AL357094.1-201ENST00000603845 844 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 BNIP3P31-201ENST00000604515 566 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL16A1Q07092 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL16A1Q07092 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
COL16A1Q07092 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL16A1Q07092 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL16A1Q07092 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
COL16A1Q07092 SNORD114-1-201ENST00000362705 72 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL16A1Q07092 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
COL16A1Q07092 AL356320.1-201ENST00000429616 163 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.7□□□□□ -1.82
COL16A1Q07092 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.7□□□□□ -1.82
COL16A1Q07092 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.7□□□□□ -1.82
COL16A1Q07092 UQCRHP3-201ENST00000451503 251 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AP002371.1-201ENST00000463604 433 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 CKS1BP2-201ENST00000497342 240 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.7□□□□□ -1.82
COL16A1Q07092 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.7□□□□□ -1.82
COL16A1Q07092 AC234775.3-201ENST00000564612 656 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC040174.2-201ENST00000602701 465 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.7□□□□□ -1.82
COL16A1Q07092 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL16A1Q07092 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
COL16A1Q07092 AL049777.1-201ENST00000622740 518 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AC079228.1-201ENST00000624774 1049 ntBASIC3.7□□□□□ -1.82
COL16A1Q07092 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.7□□□□□ -1.82
COL16A1Q07092 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.69□□□□□ -1.82
COL16A1Q07092 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.69□□□□□ -1.82
COL16A1Q07092 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL16A1Q07092 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
COL16A1Q07092 AC092881.1-201ENST00000638218 2733 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 AL079342.1-201ENST00000401460 267 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.69□□□□□ -1.82
COL16A1Q07092 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.69□□□□□ -1.82
COL16A1Q07092 AL691517.1-201ENST00000440833 1235 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.69□□□□□ -1.82
COL16A1Q07092 RPL23AP15-201ENST00000450202 459 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 AC098826.2-201ENST00000452011 651 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 HMGN2P23-201ENST00000456759 269 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.69□□□□□ -1.82
COL16A1Q07092 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
COL16A1Q07092 GOLGA5P1-201ENST00000507317 980 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.69□□□□□ -1.82
COL16A1Q07092 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.69□□□□□ -1.82
COL16A1Q07092 AC087468.1-201ENST00000604365 630 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 AC104763.3-201ENST00000613765 618 ntBASIC3.69□□□□□ -1.82
COL16A1Q07092 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL16A1Q07092 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL16A1Q07092 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL16A1Q07092 AC006020.1-201ENST00000420179 1854 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.68□□□□□ -1.82
COL16A1Q07092 RNVU1-3-201ENST00000364313 161 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 ZNF603P-201ENST00000405613 487 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
COL16A1Q07092 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.68□□□□□ -1.82
COL16A1Q07092 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.68□□□□□ -1.82
COL16A1Q07092 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.68□□□□□ -1.82
COL16A1Q07092 OR2B8P-201ENST00000432841 938 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 AL353718.1-201ENST00000451028 517 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 MTCYBP14-201ENST00000457471 715 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 MTND3P24-201ENST00000506306 329 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.68□□□□□ -1.82
COL16A1Q07092 IGKV2-36-201ENST00000519999 223 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.68□□□□□ -1.82
COL16A1Q07092 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.68□□□□□ -1.82
COL16A1Q07092 AC112503.2-201ENST00000609005 552 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.68□□□□□ -1.82
COL16A1Q07092 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.68□□□□□ -1.82
COL16A1Q07092 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.68□□□□□ -1.82
COL16A1Q07092 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
COL16A1Q07092 TTC39DP-201ENST00000416781 1688 ntBASIC3.68□□□□□ -1.82
COL16A1Q07092 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
COL16A1Q07092 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
COL16A1Q07092 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL16A1Q07092 RNU6-386P-201ENST00000362650 107 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 GTF2IP9-201ENST00000502460 301 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 OR5H3P-201ENST00000502817 919 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL16A1Q07092 AC008716.1-201ENST00000511084 513 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 AC243972.3-201ENST00000539655 198 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.67□□□□□ -1.82
COL16A1Q07092 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.67□□□□□ -1.82
COL16A1Q07092 AC022069.1-201ENST00000582910 658 ntBASIC3.67□□□□□ -1.82
COL16A1Q07092 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms