Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AP003717.3-201ENST00000544832 1180 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC090525.3-201ENST00000605601 189 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC006133.1-201ENST00000617106 264 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC099506.2-201ENST00000623074 221 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC006963.1-201ENST00000624003 1052 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AC138915.1-201ENST00000565427 1685 ntBASIC2.33□□□□□ -2.04
HIST1H1AQ02539 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HIST1H1AQ02539 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RNU6-799P-201ENST00000363567 107 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 SNORD15B-201ENST00000384714 146 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 BX682237.1-201ENST00000415016 335 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RAD23BP2-201ENST00000416003 1207 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AL353678.1-201ENST00000422735 741 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RPL37P1-201ENST00000432310 284 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RPS7P2-201ENST00000435134 607 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AL035407.2-201ENST00000454090 378 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 SNORA84-201ENST00000459229 133 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RPS29P12-201ENST00000460178 152 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RN7SL601P-201ENST00000471221 293 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RN7SL633P-201ENST00000488974 297 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AC008565.1-201ENST00000509046 885 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 MTND5P4-201ENST00000514978 288 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RN7SKP272-201ENST00000516988 232 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 OR4A45P-201ENST00000529954 901 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RPL21P12-201ENST00000559810 515 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AC138761.3-201ENST00000579993 334 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 MIR3158-1-201ENST00000583596 81 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 IGHV3-29-201ENST00000604817 344 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AC008962.1-201ENST00000605729 304 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.32□□□□□ -2.04
HIST1H1AQ02539 ZNF807-201ENST00000328088 1707 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC022031.1-201ENST00000585985 2593 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 MIR181B1-201ENST00000385240 110 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC005517.2-201ENST00000424673 553 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC097713.2-201ENST00000430199 356 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AL159987.2-201ENST00000432754 307 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 RPS26P56-201ENST00000444468 240 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 PRSS3P4-201ENST00000453323 162 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC109925.1-201ENST00000478069 331 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AP001960.1-201ENST00000506494 658 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 SEM1P1-201ENST00000506694 209 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 OSBPL9P3-201ENST00000534523 595 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 ELOCP31-201ENST00000540463 467 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC006504.3-201ENST00000586818 523 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 ELOCP35-201ENST00000604289 336 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 HSPE1P14-201ENST00000605812 302 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 AC079228.1-201ENST00000624774 1049 ntBASIC2.31□□□□□ -2.04
HIST1H1AQ02539 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.31□□□□□ -2.04
HIST1H1AQ02539 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 MIR449B-201ENST00000384995 97 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 SNORD67-201ENST00000390833 111 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms