Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
EFNA3P52797 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
EFNA3P52797 RNU6-619P-201ENST00000365146 108 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
EFNA3P52797 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 RNVU1-14-201ENST00000384770 164 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 MTND4P22-201ENST00000413116 1169 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 LIPT1P1-201ENST00000415870 1186 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 C1DP1-201ENST00000426049 402 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC097713.2-201ENST00000430199 356 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 USP9YP31-201ENST00000431405 881 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.3□□□□□ -1.88
EFNA3P52797 Z99714.1-201ENST00000450463 807 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 NDUFA5P7-201ENST00000452914 242 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC007967.1-201ENST00000455422 1159 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 HSPD1P15-201ENST00000505573 1122 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC008837.1-201ENST00000511513 412 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 RNU6-415P-201ENST00000516252 97 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 RN7SKP83-201ENST00000516512 178 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 RNU6-885P-201ENST00000516607 104 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC023632.1-201ENST00000518463 375 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC021451.1-201ENST00000523498 1129 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC104417.1-201ENST00000523974 751 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 OR8L1P-201ENST00000534005 955 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
EFNA3P52797 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
EFNA3P52797 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC007687.1-201ENST00000602704 304 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC007179.3-201ENST00000604976 235 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC018754.1-201ENST00000607486 925 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AP005137.2-201ENST00000609238 400 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC093673.2-201ENST00000609674 331 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC084824.4-201ENST00000620106 731 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNA3P52797 AC244205.2-202ENST00000635781 342 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 AC068620.4-201ENST00000636730 1182 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.3□□□□□ -1.88
EFNA3P52797 AL732372.2-225ENST00000642124 456 ntBASIC3.3□□□□□ -1.88
EFNA3P52797 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.3□□□□□ -1.88
EFNA3P52797 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
EFNA3P52797 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
EFNA3P52797 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
EFNA3P52797 MTND5P28-201ENST00000438005 1594 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
EFNA3P52797 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
EFNA3P52797 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.29□□□□□ -1.88
EFNA3P52797 RNU6-1226P-201ENST00000384317 107 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 RNU6-441P-201ENST00000384545 106 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 MIR34B-201ENST00000385076 84 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 MTCO3P31-201ENST00000405526 789 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 U3.39-201ENST00000408569 239 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC092634.2-201ENST00000428146 1010 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNA3P52797 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 RPL23AP33-201ENST00000442301 452 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.29□□□□□ -1.88
EFNA3P52797 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNA3P52797 AP000873.1-201ENST00000463987 400 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AP000893.1-201ENST00000474462 794 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.29□□□□□ -1.88
EFNA3P52797 RNU6-276P-201ENST00000516114 96 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 OR5AP1P-201ENST00000529730 940 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
EFNA3P52797 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC087897.1-201ENST00000550134 156 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms