Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MTCYBP43-201ENST00000513621 740 ntBASIC5.29□□□□□ -1.56
MRE11P49959 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.29□□□□□ -1.56
MRE11P49959 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 MIR3944-201ENST00000581277 108 ntBASIC5.29□□□□□ -1.56
MRE11P49959 AP001004.1-201ENST00000582468 324 ntBASIC5.29□□□□□ -1.56
MRE11P49959 AC006130.2-201ENST00000586202 326 ntBASIC5.29□□□□□ -1.56
MRE11P49959 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.29□□□□□ -1.56
MRE11P49959 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.29□□□□□ -1.56
MRE11P49959 AC007014.2-201ENST00000615581 479 ntBASIC5.29□□□□□ -1.56
MRE11P49959 ZYXP1-201ENST00000617638 118 ntBASIC5.29□□□□□ -1.56
MRE11P49959 AC091953.5-201ENST00000622919 233 ntBASIC5.29□□□□□ -1.56
MRE11P49959 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
MRE11P49959 AL118496.1-201ENST00000440201 1812 ntBASIC5.29□□□□□ -1.56
MRE11P49959 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MRE11P49959 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MRE11P49959 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MRE11P49959 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
MRE11P49959 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 RNA5SP428-201ENST00000365129 132 ntBASIC5.28□□□□□ -1.56
MRE11P49959 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 RNU5A-6P-201ENST00000384136 116 ntBASIC5.28□□□□□ -1.56
MRE11P49959 U3.30-201ENST00000391308 210 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 MTCYBP36-201ENST00000404146 440 ntBASIC5.28□□□□□ -1.56
MRE11P49959 CCDC58P2-201ENST00000417131 366 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC009237.2-201ENST00000421358 284 ntBASIC5.28□□□□□ -1.56
MRE11P49959 DDX39BP1-205ENST00000422507 192 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 ZNF863P-201ENST00000426746 417 ntBASIC5.28□□□□□ -1.56
MRE11P49959 RPL7P4-203ENST00000430239 730 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.28□□□□□ -1.56
MRE11P49959 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.28□□□□□ -1.56
MRE11P49959 RPL7P59-201ENST00000447700 943 ntBASIC5.28□□□□□ -1.56
MRE11P49959 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.28□□□□□ -1.56
MRE11P49959 KLF3P2-201ENST00000465138 268 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AL121769.1-201ENST00000469473 401 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC015724.1-201ENST00000478577 156 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AP000797.1-201ENST00000478870 387 ntBASIC5.28□□□□□ -1.56
MRE11P49959 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 RPS27P23-201ENST00000487608 251 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC011005.3-201ENST00000491624 395 ntBASIC5.28□□□□□ -1.56
MRE11P49959 RPL9P6-201ENST00000492764 598 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC023424.2-201ENST00000493479 777 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC239860.2-201ENST00000525886 270 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.28□□□□□ -1.56
MRE11P49959 TRAV15-201ENST00000556680 249 ntBASIC5.28□□□□□ -1.56
MRE11P49959 NPM1P47-201ENST00000560843 856 ntBASIC5.28□□□□□ -1.56
MRE11P49959 MIR3939-201ENST00000582614 106 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC010201.1-201ENST00000605051 540 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC018926.3-201ENST00000618841 406 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC233309.1-201ENST00000619522 751 ntBASIC5.28□□□□□ -1.56
MRE11P49959 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC091905.2-201ENST00000623143 306 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AL157786.1-207ENST00000627771 695 ntBASIC5.28□□□□□ -1.56
MRE11P49959 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.28□□□□□ -1.56
MRE11P49959 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
MRE11P49959 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.28□□□□□ -1.56
MRE11P49959 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.28□□□□□ -1.56
MRE11P49959 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.56
MRE11P49959 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
MRE11P49959 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
MRE11P49959 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 RNU5F-6P-201ENST00000362979 116 ntBASIC5.27□□□□□ -1.57
MRE11P49959 SNORA62.3-201ENST00000365110 153 ntBASIC5.27□□□□□ -1.57
MRE11P49959 SNORD116-23-201ENST00000384645 92 ntBASIC5.27□□□□□ -1.57
MRE11P49959 MIR181A1-201ENST00000385026 110 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL590762.2-201ENST00000395798 571 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL078604.1-201ENST00000404609 466 ntBASIC5.27□□□□□ -1.57
MRE11P49959 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 RNA5SP113-201ENST00000410486 84 ntBASIC5.27□□□□□ -1.57
MRE11P49959 RN7SKP100-201ENST00000411258 284 ntBASIC5.27□□□□□ -1.57
MRE11P49959 RNU6-603P-201ENST00000411403 107 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.27□□□□□ -1.57
MRE11P49959 DBF4P1-201ENST00000412976 1892 ntBASIC5.27□□□□□ -1.57
MRE11P49959 BOLA3P4-201ENST00000418151 400 ntBASIC5.27□□□□□ -1.57
MRE11P49959 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.27□□□□□ -1.57
MRE11P49959 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.27□□□□□ -1.57
MRE11P49959 AC062016.2-201ENST00000420950 676 ntBASIC5.27□□□□□ -1.57
MRE11P49959 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.27□□□□□ -1.57
MRE11P49959 GLRXP1-201ENST00000423261 334 ntBASIC5.27□□□□□ -1.57
MRE11P49959 MTND4P28-201ENST00000426217 387 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 RPS20P1-201ENST00000434853 354 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.27□□□□□ -1.57
MRE11P49959 MTND6P18-201ENST00000439477 513 ntBASIC5.27□□□□□ -1.57
MRE11P49959 RPS7P5-201ENST00000441482 581 ntBASIC5.27□□□□□ -1.57
MRE11P49959 HMGB3P9-201ENST00000441799 583 ntBASIC5.27□□□□□ -1.57
MRE11P49959 AL512326.1-201ENST00000443050 721 ntBASIC5.27□□□□□ -1.57
MRE11P49959 KNOP1P3-201ENST00000446933 426 ntBASIC5.27□□□□□ -1.57
MRE11P49959 PTMAP3-201ENST00000447474 330 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms