Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HTTP42858 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HTTP42858 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HTTP42858 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HTTP42858 AC026436.1-201ENST00000510537 270 ntBASIC2.69□□□□□ -1.98
HTTP42858 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HTTP42858 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.69□□□□□ -1.98
HTTP42858 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HTTP42858 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 NPM1P49-201ENST00000448027 714 ntBASIC2.68□□□□□ -1.98
HTTP42858 RPL21P41-201ENST00000459863 264 ntBASIC2.68□□□□□ -1.98
HTTP42858 AC009570.1-201ENST00000609599 745 ntBASIC2.68□□□□□ -1.98
HTTP42858 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 AC005261.6-201ENST00000623072 1387 ntBASIC2.68□□□□□ -1.98
HTTP42858 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HTTP42858 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
HTTP42858 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 ST13P20-201ENST00000447996 1065 ntBASIC2.68□□□□□ -1.98
HTTP42858 NIPA2P2-201ENST00000496376 1083 ntBASIC2.68□□□□□ -1.98
HTTP42858 ACTR6P1-201ENST00000514311 1104 ntBASIC2.68□□□□□ -1.98
HTTP42858 AC068657.1-201ENST00000520807 306 ntBASIC2.68□□□□□ -1.98
HTTP42858 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.68□□□□□ -1.98
HTTP42858 AC074029.1-201ENST00000552531 1044 ntBASIC2.68□□□□□ -1.98
HTTP42858 AC135628.1-201ENST00000568867 534 ntBASIC2.68□□□□□ -1.98
HTTP42858 AL359821.1-201ENST00000605519 182 ntBASIC2.68□□□□□ -1.98
HTTP42858 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
HTTP42858 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 NDUFA5P4-201ENST00000436704 385 ntBASIC2.68□□□□□ -1.98
HTTP42858 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.68□□□□□ -1.98
HTTP42858 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.68□□□□□ -1.98
HTTP42858 AC005046.1-201ENST00000608515 625 ntBASIC2.68□□□□□ -1.98
HTTP42858 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.68□□□□□ -1.98
HTTP42858 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HTTP42858 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HTTP42858 RPL23AP16-201ENST00000441715 421 ntBASIC2.67□□□□□ -1.98
HTTP42858 SNRPGP9-201ENST00000456025 225 ntBASIC2.67□□□□□ -1.98
HTTP42858 RN7SL442P-201ENST00000473804 320 ntBASIC2.67□□□□□ -1.98
HTTP42858 SNORA9.3-201ENST00000516383 129 ntBASIC2.67□□□□□ -1.98
HTTP42858 SNORA64.4-201ENST00000516632 81 ntBASIC2.67□□□□□ -1.98
HTTP42858 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.67□□□□□ -1.98
HTTP42858 AC061975.8-201ENST00000587058 721 ntBASIC2.67□□□□□ -1.98
HTTP42858 AL365503.1-201ENST00000605247 905 ntBASIC2.67□□□□□ -1.98
HTTP42858 AC090897.3-201ENST00000636973 1157 ntBASIC2.67□□□□□ -1.98
HTTP42858 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HTTP42858 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HTTP42858 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.67□□□□□ -1.98
HTTP42858 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.67□□□□□ -1.98
HTTP42858 VN1R17P-201ENST00000472048 1090 ntBASIC2.67□□□□□ -1.98
HTTP42858 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HTTP42858 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.67□□□□□ -1.98
HTTP42858 AP004247.3-201ENST00000608682 624 ntBASIC2.67□□□□□ -1.98
HTTP42858 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 Z82205.1-201ENST00000428456 297 ntBASIC2.66□□□□□ -1.98
HTTP42858 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 AK6P1-201ENST00000540219 478 ntBASIC2.66□□□□□ -1.98
HTTP42858 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 RPP40P2-201ENST00000603596 712 ntBASIC2.66□□□□□ -1.98
HTTP42858 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HTTP42858 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HTTP42858 AC080125.1-201ENST00000414888 684 ntBASIC2.66□□□□□ -1.98
HTTP42858 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 RN7SKP43-201ENST00000516173 320 ntBASIC2.66□□□□□ -1.98
HTTP42858 AC245166.1-201ENST00000521012 253 ntBASIC2.66□□□□□ -1.98
HTTP42858 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 MTCYBP28-201ENST00000566728 1132 ntBASIC2.66□□□□□ -1.98
HTTP42858 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
HTTP42858 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 RNU6-321P-201ENST00000410912 106 ntBASIC2.66□□□□□ -1.98
HTTP42858 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HTTP42858 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 GNAI2P1-201ENST00000541815 315 ntBASIC2.66□□□□□ -1.98
HTTP42858 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.66□□□□□ -1.98
HTTP42858 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HTTP42858 USP9YP20-201ENST00000419224 558 ntBASIC2.65□□□□□ -1.98
HTTP42858 HSPE1P16-201ENST00000426640 348 ntBASIC2.65□□□□□ -1.98
HTTP42858 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.65□□□□□ -1.98
HTTP42858 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HTTP42858 AC141257.3-201ENST00000572906 215 ntBASIC2.65□□□□□ -1.98
HTTP42858 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
HTTP42858 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.65□□□□□ -1.98
HTTP42858 AL353743.4-201ENST00000422653 1547 ntBASIC2.65□□□□□ -1.99
HTTP42858 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.65□□□□□ -1.99
HTTP42858 AC107081.1-201ENST00000414975 361 ntBASIC2.65□□□□□ -1.99
HTTP42858 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms