Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCNFP41002 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCNFP41002 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CCNFP41002 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCNFP41002 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCNFP41002 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
CCNFP41002 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNFP41002 Z95327.2-201ENST00000414579 1873 ntBASIC5.33□□□□□ -1.56
CCNFP41002 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 OR1S2-201ENST00000302592 978 ntBASIC5.33□□□□□ -1.56
CCNFP41002 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 Y_RNA.67-201ENST00000362870 100 ntBASIC5.33□□□□□ -1.56
CCNFP41002 RNVU1-3-201ENST00000364313 161 ntBASIC5.33□□□□□ -1.56
CCNFP41002 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNFP41002 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 Y_RNA.419-201ENST00000384041 102 ntBASIC5.33□□□□□ -1.56
CCNFP41002 RNU6-74P-201ENST00000384235 107 ntBASIC5.33□□□□□ -1.56
CCNFP41002 RPL32P23-201ENST00000397237 405 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AL049697.2-201ENST00000403708 294 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 AF228730.4-201ENST00000421457 183 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 RPL34P6-201ENST00000432390 345 ntBASIC5.33□□□□□ -1.56
CCNFP41002 TIMM9P1-201ENST00000436122 256 ntBASIC5.33□□□□□ -1.56
CCNFP41002 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNFP41002 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.33□□□□□ -1.56
CCNFP41002 AC105399.1-202ENST00000447303 205 ntBASIC5.33□□□□□ -1.56
CCNFP41002 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 AL136038.1-201ENST00000497246 351 ntBASIC5.33□□□□□ -1.56
CCNFP41002 HMGB1P21-201ENST00000502313 581 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 AC103851.1-201ENST00000506833 274 ntBASIC5.33□□□□□ -1.56
CCNFP41002 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.33□□□□□ -1.56
CCNFP41002 AL442663.2-201ENST00000554385 511 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNFP41002 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.33□□□□□ -1.56
CCNFP41002 AL355375.2-201ENST00000574825 175 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.33□□□□□ -1.56
CCNFP41002 AC011445.2-201ENST00000599274 173 ntBASIC5.33□□□□□ -1.56
CCNFP41002 AL589674.2-201ENST00000604304 337 ntBASIC5.33□□□□□ -1.56
CCNFP41002 PART1_1.1-201ENST00000611761 217 ntBASIC5.33□□□□□ -1.56
CCNFP41002 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 AL596245.1-201ENST00000618994 362 ntBASIC5.33□□□□□ -1.56
CCNFP41002 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 AC090617.10-201ENST00000624308 134 ntBASIC5.33□□□□□ -1.56
CCNFP41002 MIR1302-1-201ENST00000637932 143 ntBASIC5.33□□□□□ -1.56
CCNFP41002 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCNFP41002 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCNFP41002 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCNFP41002 OR4G1P-203ENST00000641984 1631 ntBASIC5.33□□□□□ -1.56
CCNFP41002 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCNFP41002 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 AC006020.1-201ENST00000420179 1854 ntBASIC5.32□□□□□ -1.56
CCNFP41002 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCNFP41002 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 AC100778.3-201ENST00000580060 1750 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC000374.1-201ENST00000434698 1745 ntBASIC5.32□□□□□ -1.56
CCNFP41002 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.32□□□□□ -1.56
CCNFP41002 Y_RNA.166-201ENST00000363730 102 ntBASIC5.32□□□□□ -1.56
CCNFP41002 Y_RNA.255-201ENST00000364581 97 ntBASIC5.32□□□□□ -1.56
CCNFP41002 RN7SKP153-201ENST00000365026 316 ntBASIC5.32□□□□□ -1.56
CCNFP41002 RNU6-996P-201ENST00000365438 107 ntBASIC5.32□□□□□ -1.56
CCNFP41002 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 MIR589-201ENST00000385238 99 ntBASIC5.32□□□□□ -1.56
CCNFP41002 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCNFP41002 AC004987.3-201ENST00000413879 771 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 MTCYBP8-201ENST00000422855 651 ntBASIC5.32□□□□□ -1.56
CCNFP41002 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 AC018644.1-201ENST00000429934 551 ntBASIC5.32□□□□□ -1.56
CCNFP41002 OR4K11P-201ENST00000431829 904 ntBASIC5.32□□□□□ -1.56
CCNFP41002 FTH1P1-201ENST00000437933 532 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC127537.2-201ENST00000439258 465 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AL390119.1-201ENST00000440329 312 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCNFP41002 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 AL049714.1-201ENST00000466686 347 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC100832.1-201ENST00000471945 383 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.32□□□□□ -1.56
CCNFP41002 AC114797.1-201ENST00000514003 728 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AP006245.2-201ENST00000522004 300 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC107953.1-201ENST00000522216 297 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 AP003072.2-201ENST00000527756 676 ntBASIC5.32□□□□□ -1.56
CCNFP41002 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.32□□□□□ -1.56
CCNFP41002 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 AL121821.2-201ENST00000556081 394 ntBASIC5.32□□□□□ -1.56
CCNFP41002 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.32□□□□□ -1.56
CCNFP41002 RPL21P12-201ENST00000559810 515 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms