Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 Y_RNA.688-201ENST00000516565 95 ntBASIC4.14□□□□□ -1.75
USP8P40818 NDUFA5P2-201ENST00000519723 344 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC093331.1-201ENST00000521474 169 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC008562.1-201ENST00000521763 330 ntBASIC4.14□□□□□ -1.75
USP8P40818 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP8P40818 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.14□□□□□ -1.75
USP8P40818 AC004217.3-201ENST00000551552 878 ntBASIC4.14□□□□□ -1.75
USP8P40818 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.14□□□□□ -1.75
USP8P40818 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 DPRXP5-201ENST00000604662 539 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC069545.1-201ENST00000605671 358 ntBASIC4.14□□□□□ -1.75
USP8P40818 BRDTP1-201ENST00000605735 677 ntBASIC4.14□□□□□ -1.75
USP8P40818 RMST_8.1-201ENST00000610287 165 ntBASIC4.14□□□□□ -1.75
USP8P40818 ZYXP1-201ENST00000617638 118 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC092628.2-201ENST00000622492 339 ntBASIC4.14□□□□□ -1.75
USP8P40818 AC116618.1-201ENST00000634617 774 ntBASIC4.14□□□□□ -1.75
USP8P40818 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
USP8P40818 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USP8P40818 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
USP8P40818 AC046144.1-201ENST00000478559 1853 ntBASIC4.13□□□□□ -1.75
USP8P40818 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 Z99496.1-201ENST00000469424 1477 ntBASIC4.13□□□□□ -1.75
USP8P40818 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 RNU6-560P-201ENST00000364007 108 ntBASIC4.13□□□□□ -1.75
USP8P40818 U1.1-201ENST00000384101 164 ntBASIC4.13□□□□□ -1.75
USP8P40818 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.13□□□□□ -1.75
USP8P40818 PRELID3BP11-201ENST00000414230 479 ntBASIC4.13□□□□□ -1.75
USP8P40818 RPS15AP6-201ENST00000420703 385 ntBASIC4.13□□□□□ -1.75
USP8P40818 MRPS36P1-201ENST00000421291 307 ntBASIC4.13□□□□□ -1.75
USP8P40818 RPL31P12-201ENST00000422587 358 ntBASIC4.13□□□□□ -1.75
USP8P40818 AL139421.1-201ENST00000423010 169 ntBASIC4.13□□□□□ -1.75
USP8P40818 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 RAB11AP1-201ENST00000442978 646 ntBASIC4.13□□□□□ -1.75
USP8P40818 SNRPGP3-201ENST00000469405 227 ntBASIC4.13□□□□□ -1.75
USP8P40818 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.13□□□□□ -1.75
USP8P40818 AC108734.3-201ENST00000481241 1165 ntBASIC4.13□□□□□ -1.75
USP8P40818 TRBV12-2-201ENST00000489763 344 ntBASIC4.13□□□□□ -1.75
USP8P40818 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 AC048346.1-201ENST00000510247 144 ntBASIC4.13□□□□□ -1.75
USP8P40818 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 ARL2BPP6-201ENST00000512757 439 ntBASIC4.13□□□□□ -1.75
USP8P40818 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 AC008494.2-201ENST00000514544 370 ntBASIC4.13□□□□□ -1.75
USP8P40818 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 RNU6-885P-201ENST00000516607 104 ntBASIC4.13□□□□□ -1.75
USP8P40818 RN7SKP60-201ENST00000516985 239 ntBASIC4.13□□□□□ -1.75
USP8P40818 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 AP001317.1-201ENST00000531194 960 ntBASIC4.13□□□□□ -1.75
USP8P40818 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.13□□□□□ -1.75
USP8P40818 AC087465.1-201ENST00000560574 245 ntBASIC4.13□□□□□ -1.75
USP8P40818 AC090877.1-201ENST00000561418 344 ntBASIC4.13□□□□□ -1.75
USP8P40818 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 AC006270.2-201ENST00000578523 652 ntBASIC4.13□□□□□ -1.75
USP8P40818 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 Z99497.2-201ENST00000603634 310 ntBASIC4.13□□□□□ -1.75
USP8P40818 AL022161.1-201ENST00000604390 213 ntBASIC4.13□□□□□ -1.75
USP8P40818 AP003973.1-201ENST00000604639 691 ntBASIC4.13□□□□□ -1.75
USP8P40818 AL451074.6-201ENST00000608512 729 ntBASIC4.13□□□□□ -1.75
USP8P40818 AP004247.3-201ENST00000608682 624 ntBASIC4.13□□□□□ -1.75
USP8P40818 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.13□□□□□ -1.75
USP8P40818 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.13□□□□□ -1.75
USP8P40818 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 MIR3974-201ENST00000637126 96 ntBASIC4.13□□□□□ -1.75
USP8P40818 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 ZNF542P-204ENST00000482727 1305 ntBASIC4.13□□□□□ -1.75
USP8P40818 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 AP000776.1-201ENST00000530032 1663 ntBASIC4.13□□□□□ -1.75
USP8P40818 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP8P40818 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP8P40818 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.12□□□□□ -1.75
USP8P40818 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
USP8P40818 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.12□□□□□ -1.75
USP8P40818 SAGE2P-201ENST00000420011 2126 ntBASIC4.12□□□□□ -1.75
USP8P40818 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
USP8P40818 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
USP8P40818 RNU6-839P-201ENST00000363347 108 ntBASIC4.12□□□□□ -1.75
USP8P40818 SNORA70.2-201ENST00000364506 135 ntBASIC4.12□□□□□ -1.75
USP8P40818 MIR217-201ENST00000384817 110 ntBASIC4.12□□□□□ -1.75
USP8P40818 MIR1302-8-201ENST00000408342 128 ntBASIC4.12□□□□□ -1.75
USP8P40818 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.12□□□□□ -1.75
USP8P40818 RNU2-42P-201ENST00000410697 113 ntBASIC4.12□□□□□ -1.75
USP8P40818 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.12□□□□□ -1.75
USP8P40818 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.12□□□□□ -1.75
USP8P40818 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.12□□□□□ -1.75
USP8P40818 AL593851.1-201ENST00000426171 157 ntBASIC4.12□□□□□ -1.75
USP8P40818 USP9YP11-201ENST00000427537 717 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms