Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC234772.1-201ENST00000377927 937 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RNU6-1226P-201ENST00000384317 107 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RPL31P1-201ENST00000398116 372 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.34□□□□□ -1.87
FDFT1P37268 PTGES3P2-201ENST00000407942 482 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RPL23AP47-201ENST00000408017 460 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RNA5SP56-201ENST00000410277 118 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RPS29P4-201ENST00000414733 161 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL606495.1-201ENST00000422100 813 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RPL17P35-201ENST00000432217 549 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC010881.1-201ENST00000433830 235 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL590103.1-201ENST00000434488 307 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 RPL21P133-201ENST00000443666 476 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FDFT1P37268 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
FDFT1P37268 RNA5SP217-201ENST00000515959 91 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 IGKV2D-36-201ENST00000518643 226 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.34□□□□□ -1.87
FDFT1P37268 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.34□□□□□ -1.87
FDFT1P37268 MTCO1P49-201ENST00000523429 802 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AP003168.1-201ENST00000530091 307 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC092470.1-201ENST00000546187 132 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC022069.1-201ENST00000582910 658 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 MIR4276-201ENST00000584832 70 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AC006130.2-201ENST00000586202 326 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.34□□□□□ -1.87
FDFT1P37268 BNIP3P4-201ENST00000604946 565 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 VN1R9P-201ENST00000614184 867 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL157817.1-201ENST00000614264 790 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL162574.2-201ENST00000614618 657 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 AL356863.1-201ENST00000623378 1080 ntBASIC3.34□□□□□ -1.87
FDFT1P37268 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.34□□□□□ -1.87
FDFT1P37268 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.34□□□□□ -1.87
FDFT1P37268 AC025263.3-201ENST00000622965 1396 ntBASIC3.34□□□□□ -1.88
FDFT1P37268 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
FDFT1P37268 AL672296.1-201ENST00000427780 2158 ntBASIC3.34□□□□□ -1.88
FDFT1P37268 AC024341.1-201ENST00000526444 1552 ntBASIC3.34□□□□□ -1.88
FDFT1P37268 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 AL049781.1-201ENST00000623195 3585 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 AC002546.1-201ENST00000588041 2504 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.33□□□□□ -1.88
FDFT1P37268 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FDFT1P37268 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 AC006960.1-201ENST00000419980 153 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 RPL26P28-201ENST00000451325 435 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 AC092754.2-201ENST00000463506 460 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 RN7SL542P-201ENST00000467147 294 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.33□□□□□ -1.88
FDFT1P37268 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 OR5H3P-201ENST00000502817 919 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AC112518.2-201ENST00000508565 425 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
FDFT1P37268 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 OR8I1P-201ENST00000529291 931 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 OR8K4P-201ENST00000534608 872 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.33□□□□□ -1.88
FDFT1P37268 AL669831.4-202ENST00000590817 238 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FDFT1P37268 U3.45-201ENST00000607547 219 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AC016542.1-201ENST00000608259 493 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AC021851.1-201ENST00000608537 1082 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FDFT1P37268 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FDFT1P37268 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FDFT1P37268 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
FDFT1P37268 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.33□□□□□ -1.88
FDFT1P37268 Z83843.1-201ENST00000604070 3685 ntBASIC3.33□□□□□ -1.88
FDFT1P37268 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
FDFT1P37268 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
FDFT1P37268 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms