Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NAP1L1P3-201ENST00000462291 880 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 RPL21P131-201ENST00000497298 483 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGCLP35914 AC110768.1-201ENST00000509222 400 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGCLP35914 PTP4A1P6-201ENST00000531034 478 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCLP35914 AL442163.2-201ENST00000553912 710 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGCLP35914 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HMGCLP35914 AL392112.1-201ENST00000605115 829 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 AL450489.1-201ENST00000612071 468 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 VN1R74P-201ENST00000613259 503 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 AC010975.3-201ENST00000618727 978 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 AC006065.5-201ENST00000623427 349 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCLP35914 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCLP35914 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
HMGCLP35914 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
HMGCLP35914 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL353746.1-201ENST00000566293 6881 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCLP35914 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AC004022.2-201ENST00000413824 193 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGCLP35914 AC234064.1-201ENST00000436312 247 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 PDSS1P2-201ENST00000449397 678 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 MRPL42P4-201ENST00000453267 443 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 DUXAP8-207ENST00000456786 622 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AC078918.1-201ENST00000498515 228 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 MTATP6P22-201ENST00000507369 598 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGCLP35914 AF279873.1-201ENST00000523393 313 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGCLP35914 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCLP35914 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 NIFKP8-201ENST00000560500 874 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.47□□□□□ -1.85
HMGCLP35914 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL365503.1-201ENST00000605247 905 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AC106052.1-201ENST00000608029 497 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AP005137.2-201ENST00000609238 400 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 DUXAP10-204ENST00000612052 616 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AL592148.2-201ENST00000612210 372 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AC105227.2-201ENST00000615075 605 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AC121761.2-201ENST00000617300 689 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HMGCLP35914 AL157770.1-201ENST00000623049 439 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AL078595.3-201ENST00000623815 1166 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 OR1S1-201ENST00000624470 978 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 AL109659.3-201ENST00000624985 950 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCLP35914 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.47□□□□□ -1.85
HMGCLP35914 MTND4P8-201ENST00000514997 1362 ntBASIC3.47□□□□□ -1.85
HMGCLP35914 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGCLP35914 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCLP35914 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HMGCLP35914 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HMGCLP35914 AC005183.1-201ENST00000603687 1979 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 MIR217-201ENST00000384817 110 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 MIR449B-201ENST00000384995 97 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCLP35914 PRRC2CP1-201ENST00000404428 159 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 RNU2-21P-201ENST00000410368 188 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 MTATP6P20-201ENST00000414147 562 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 BTF3P8-201ENST00000414577 526 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AIMP1P1-201ENST00000418670 937 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AC009237.2-201ENST00000421358 284 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms