Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 FCF1P2-201ENST00000415284 583 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 HMGB3P20-201ENST00000417997 600 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.41□□□□□ -1.7
TM4SF1P30408 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 RPL29P29-201ENST00000448725 423 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 RPL37P6-202ENST00000464216 403 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.41□□□□□ -1.7
TM4SF1P30408 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TM4SF1P30408 OR8L1P-201ENST00000534005 955 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 AC106052.1-201ENST00000608029 497 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 OR6R2P-201ENST00000609216 300 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 AL354976.1-201ENST00000613843 387 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 AC022509.4-201ENST00000621404 572 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 AC098679.5-201ENST00000624394 571 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 AL353743.1-202ENST00000431724 1695 ntBASIC4.41□□□□□ -1.7
TM4SF1P30408 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.41□□□□□ -1.7
TM4SF1P30408 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TM4SF1P30408 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TM4SF1P30408 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TM4SF1P30408 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TM4SF1P30408 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TM4SF1P30408 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TM4SF1P30408 MIR124-3-201ENST00000384866 87 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 SNORA40.2-201ENST00000390847 128 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 HSPD1P16-201ENST00000402302 394 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 RN7SKP53-201ENST00000411337 315 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AL133384.1-201ENST00000412744 351 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AL136133.1-201ENST00000413694 376 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 RPL31P2-201ENST00000413849 377 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AC009237.2-201ENST00000421358 284 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 MTND2P5-201ENST00000432656 1006 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 ELOCP18-201ENST00000434209 337 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AC093155.1-201ENST00000440164 826 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AL831737.1-201ENST00000441288 271 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AL009048.1-201ENST00000450437 298 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 TRBV26-201ENST00000456572 344 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AP001992.1-205ENST00000462248 379 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AC084024.2-201ENST00000503480 791 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 KLRA1P-201ENST00000503499 986 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AC087808.1-201ENST00000520501 361 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 ZNF705CP-201ENST00000530515 889 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TM4SF1P30408 TRAV15-201ENST00000556680 249 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 CKS1BP3-201ENST00000600888 237 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 AC016877.3-201ENST00000606778 504 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 AP003355.3-201ENST00000623465 114 ntBASIC4.4□□□□□ -1.71
TM4SF1P30408 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
TM4SF1P30408 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TM4SF1P30408 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TM4SF1P30408 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TM4SF1P30408 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.4□□□□□ -1.71
TM4SF1P30408 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TM4SF1P30408 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TM4SF1P30408 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.39□□□□□ -1.71
TM4SF1P30408 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TM4SF1P30408 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
TM4SF1P30408 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.39□□□□□ -1.71
TM4SF1P30408 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
TM4SF1P30408 FRG1CP-201ENST00000358464 769 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 SUGT1P1-201ENST00000379514 476 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TM4SF1P30408 RNU6-636P-201ENST00000384598 107 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 RNU4-22P-201ENST00000411058 166 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 RPS12P23-201ENST00000419579 400 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.39□□□□□ -1.71
TM4SF1P30408 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.39□□□□□ -1.71
TM4SF1P30408 RWDD4P2-201ENST00000426392 563 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 USP9YP31-201ENST00000431405 881 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 AC005345.1-201ENST00000431868 217 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.39□□□□□ -1.71
TM4SF1P30408 RPL23AP16-201ENST00000441715 421 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 MTCO1P48-201ENST00000448024 1096 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.39□□□□□ -1.71
TM4SF1P30408 AC099563.1-201ENST00000456086 418 ntBASIC4.39□□□□□ -1.71
TM4SF1P30408 AC005410.1-202ENST00000460347 485 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms