Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MIR4691-201ENST00000583764 85 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC004223.2-201ENST00000590309 544 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFSF4P23510 AC087783.2-201ENST00000605070 562 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC084782.3-201ENST00000612282 578 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 MIR6719-201ENST00000622428 87 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AL159972.1-201ENST00000625150 448 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 MIR4275-201ENST00000636486 87 ntBASIC4.25□□□□□ -1.73
TNFSF4P23510 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TNFSF4P23510 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFSF4P23510 TAB3P1-202ENST00000452645 1634 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 USP8P1-201ENST00000494673 3183 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC095050.2-201ENST00000510748 1458 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC139713.2-215ENST00000641428 5037 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC092104.1-201ENST00000497346 1441 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF4P23510 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 RNU6-432P-201ENST00000384196 109 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 RNU6-1119P-201ENST00000384349 108 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 MIR19A-201ENST00000384878 82 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF4P23510 SSXP9-201ENST00000417503 292 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 FTH1P1-201ENST00000437933 532 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 MTND6P13-201ENST00000443510 523 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 SLC25A18P1-201ENST00000449385 454 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF4P23510 snoU13.4-201ENST00000458916 104 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC022795.1-201ENST00000473808 480 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 NIFKP7-201ENST00000503365 834 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 NDUFB5P1-201ENST00000508134 564 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC004062.1-201ENST00000509926 645 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF4P23510 MTCO2P32-201ENST00000514865 403 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 RNA5SP43-201ENST00000516559 110 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 Y_RNA.719-201ENST00000517156 106 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC105031.1-201ENST00000518550 476 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC012339.2-201ENST00000523996 453 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC123904.2-201ENST00000548059 300 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 OR4T1P-201ENST00000554933 911 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.24□□□□□ -1.73
TNFSF4P23510 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF4P23510 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF4P23510 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.24□□□□□ -1.73
TNFSF4P23510 AL022099.1-201ENST00000604551 712 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AP001521.2-201ENST00000608772 546 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 BX664608.1-201ENST00000610519 487 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 AC090970.3-201ENST00000612566 866 ntBASIC4.24□□□□□ -1.73
TNFSF4P23510 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFSF4P23510 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFSF4P23510 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
TNFSF4P23510 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 AC009643.2-201ENST00000603543 1448 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 INTS6P1-201ENST00000504674 2530 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TNFSF4P23510 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TNFSF4P23510 RNU6-223P-201ENST00000362830 107 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 RNU5A-8P-201ENST00000364102 114 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 SNORD116-4-201ENST00000384733 96 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TNFSF4P23510 DEFB108C-201ENST00000400154 252 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 MRPL42P2-201ENST00000403169 426 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 RNU6-248P-201ENST00000410720 107 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 RNU2-8P-201ENST00000410727 190 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TNFSF4P23510 MTCO1P39-201ENST00000426148 480 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 RPL21P66-201ENST00000426566 466 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.23□□□□□ -1.73
TNFSF4P23510 BX323845.1-201ENST00000432417 179 ntBASIC4.23□□□□□ -1.73
TNFSF4P23510 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms