Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SNORD116-11-201ENST00000383882 92 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 RNU6-890P-201ENST00000384121 107 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NFKB1P19838 RNU4-61P-201ENST00000411243 107 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 GSTM3P2-201ENST00000412746 530 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.77□□□□□ -1.49
NFKB1P19838 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 RAC1P6-201ENST00000423911 575 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 PSMA6P3-201ENST00000428242 164 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 RAC1P7-201ENST00000445367 377 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 CEACAMP4-201ENST00000457676 421 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC011476.1-201ENST00000466725 307 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AL136126.1-201ENST00000473603 402 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC087879.1-201ENST00000474343 374 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 TRBV1-201ENST00000476502 284 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC022215.1-201ENST00000481770 362 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 RN7SL284P-201ENST00000498823 275 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC093767.1-201ENST00000504523 156 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC093815.1-201ENST00000508637 280 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC107222.1-201ENST00000510899 637 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 RNA5SP271-201ENST00000516700 88 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 IGLV3-24-201ENST00000517477 197 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 CYCSP22-201ENST00000517555 339 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.77□□□□□ -1.49
NFKB1P19838 BNIP3P16-201ENST00000589779 534 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 AP005431.1-201ENST00000618479 319 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.77□□□□□ -1.49
NFKB1P19838 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.77□□□□□ -1.49
NFKB1P19838 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 ZNF519P1-201ENST00000449011 1626 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 AL034546.1-201ENST00000623740 3693 ntBASIC5.77□□□□□ -1.49
NFKB1P19838 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NFKB1P19838 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
NFKB1P19838 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.76□□□□□ -1.49
NFKB1P19838 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
NFKB1P19838 AL355834.1-201ENST00000556602 3965 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.76□□□□□ -1.49
NFKB1P19838 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 OR52B3P-201ENST00000314715 928 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 SNORA64.1-201ENST00000362600 132 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 Y_RNA.257-201ENST00000364596 102 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 RNU6-328P-201ENST00000390887 106 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 RNU4-6P-201ENST00000410804 122 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NFKB1P19838 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.76□□□□□ -1.49
NFKB1P19838 TMEM183AP1-205ENST00000432739 290 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 RPS24P13-201ENST00000442520 397 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC058823.1-201ENST00000485315 474 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC068305.1-201ENST00000497406 726 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 RPS27AP18-201ENST00000515536 459 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 Y_RNA.668-201ENST00000516233 93 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 RNU6-388P-201ENST00000517012 105 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 RNU6-389P-201ENST00000517048 105 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC022360.1-201ENST00000521058 340 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.76□□□□□ -1.49
NFKB1P19838 OR11H5P-201ENST00000554039 926 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms