Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RWDD4P1-201ENST00000488019 565 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.91□□□□□ -1.94
COL11A1P12107 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.91□□□□□ -1.94
COL11A1P12107 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.91□□□□□ -1.94
COL11A1P12107 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.91□□□□□ -1.94
COL11A1P12107 AC008277.2-201ENST00000605196 797 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AC103810.6-201ENST00000606708 136 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AL137246.1-201ENST00000607072 977 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.91□□□□□ -1.94
COL11A1P12107 AC025034.2-201ENST00000623264 286 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL11A1P12107 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL11A1P12107 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.91□□□□□ -1.94
COL11A1P12107 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL11A1P12107 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.91□□□□□ -1.94
COL11A1P12107 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL11A1P12107 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
COL11A1P12107 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL11A1P12107 RNVU1-3-201ENST00000364313 161 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.91□□□□□ -1.94
COL11A1P12107 SNORA70E-201ENST00000384492 135 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.91□□□□□ -1.94
COL11A1P12107 UBE2V2P4-201ENST00000447495 259 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.91□□□□□ -1.94
COL11A1P12107 AP003102.1-201ENST00000525638 661 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL11A1P12107 AC105036.1-201ENST00000566222 271 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 MTND2P13-201ENST00000577438 1039 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 AL450489.1-201ENST00000612071 468 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.91□□□□□ -1.94
COL11A1P12107 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL11A1P12107 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.94
COL11A1P12107 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COL11A1P12107 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL11A1P12107 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL11A1P12107 RN7SKP44-201ENST00000363602 316 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL11A1P12107 MIR887-201ENST00000401258 79 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AC069218.2-201ENST00000411665 344 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.9□□□□□ -1.95
COL11A1P12107 SMC4P1-201ENST00000414479 527 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 USP9YP20-201ENST00000419224 558 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AL049610.1-201ENST00000423374 372 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.9□□□□□ -1.95
COL11A1P12107 CBX1P4-201ENST00000439415 457 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.9□□□□□ -1.95
COL11A1P12107 AL590399.6-201ENST00000446396 307 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 RN7SL297P-201ENST00000483161 293 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AC011037.1-201ENST00000483964 558 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.9□□□□□ -1.95
COL11A1P12107 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.9□□□□□ -1.95
COL11A1P12107 AC055876.1-202ENST00000567053 138 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 SNORD53-201ENST00000579969 78 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL11A1P12107 AC012119.1-201ENST00000603184 222 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 AP003072.5-201ENST00000623872 773 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.9□□□□□ -1.95
COL11A1P12107 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
COL11A1P12107 AC022031.1-201ENST00000585985 2593 ntBASIC2.9□□□□□ -1.95
COL11A1P12107 MIR27B-201ENST00000385129 97 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 RNA5SP210-201ENST00000391034 120 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.89□□□□□ -1.95
COL11A1P12107 AL356320.1-201ENST00000429616 163 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 RPS20P5-201ENST00000434808 360 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 ST13P20-201ENST00000447996 1065 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.89□□□□□ -1.95
COL11A1P12107 AL135786.1-201ENST00000415892 214 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 AIMP1P1-201ENST00000418670 937 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.89□□□□□ -1.95
COL11A1P12107 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC008716.1-201ENST00000511084 513 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 USP9YP5-201ENST00000511770 630 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.89□□□□□ -1.95
COL11A1P12107 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.89□□□□□ -1.95
COL11A1P12107 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 AP001646.1-201ENST00000527936 915 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 AC128657.1-201ENST00000549459 145 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL11A1P12107 AL713998.2-201ENST00000604538 1198 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.89□□□□□ -1.95
COL11A1P12107 CRYM-AS1-204ENST00000637983 556 ntBASIC2.89□□□□□ -1.95
COL11A1P12107 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms