Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL451044.1-201ENST00000604867 238 ntBASIC6.77□□□□□ -1.33
RNF40O75150 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.77□□□□□ -1.33
RNF40O75150 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF40O75150 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
RNF40O75150 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RNF40O75150 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 AL355834.1-201ENST00000556602 3965 ntBASIC6.77□□□□□ -1.33
RNF40O75150 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 AC134882.1-201ENST00000603738 1676 ntBASIC6.77□□□□□ -1.33
RNF40O75150 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF40O75150 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RNF40O75150 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF40O75150 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF40O75150 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.77□□□□□ -1.33
RNF40O75150 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
RNF40O75150 RBPJP2-201ENST00000618187 1444 ntBASIC6.76□□□□□ -1.33
RNF40O75150 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 MAPK10-287ENST00000641217 3037 ntBASIC6.76□□□□□ -1.33
RNF40O75150 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF40O75150 RNU11-201ENST00000387069 134 ntBASIC6.76□□□□□ -1.33
RNF40O75150 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF40O75150 DBIP1-201ENST00000401435 260 ntBASIC6.76□□□□□ -1.33
RNF40O75150 RNU6-130P-201ENST00000411112 103 ntBASIC6.76□□□□□ -1.33
RNF40O75150 HMGN1P24-201ENST00000412282 298 ntBASIC6.76□□□□□ -1.33
RNF40O75150 OSTCP4-201ENST00000424397 449 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AC239367.3-201ENST00000428996 814 ntBASIC6.76□□□□□ -1.33
RNF40O75150 SETP20-201ENST00000457046 852 ntBASIC6.76□□□□□ -1.33
RNF40O75150 RNU7-187P-201ENST00000458985 68 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF40O75150 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF40O75150 SNORA25.14-201ENST00000516481 132 ntBASIC6.76□□□□□ -1.33
RNF40O75150 RNU6-64P-201ENST00000517119 105 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AC034114.1-201ENST00000520293 285 ntBASIC6.76□□□□□ -1.33
RNF40O75150 RANP3-201ENST00000530970 276 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF40O75150 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 AL360012.1-201ENST00000602813 131 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AL390123.1-201ENST00000603216 237 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AC008162.1-201ENST00000604718 254 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AL670379.4-201ENST00000605279 254 ntBASIC6.76□□□□□ -1.33
RNF40O75150 AC022400.9-201ENST00000623633 273 ntBASIC6.76□□□□□ -1.33
RNF40O75150 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
RNF40O75150 AC011933.2-201ENST00000578539 2790 ntBASIC6.76□□□□□ -1.33
RNF40O75150 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF40O75150 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF40O75150 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF40O75150 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 AC020658.2-201ENST00000559030 4020 ntBASIC6.75□□□□□ -1.33
RNF40O75150 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF40O75150 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF40O75150 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 Y_RNA.183-201ENST00000363882 113 ntBASIC6.75□□□□□ -1.33
RNF40O75150 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 RPL21P24-201ENST00000413752 448 ntBASIC6.75□□□□□ -1.33
RNF40O75150 AL929472.1-201ENST00000417484 429 ntBASIC6.75□□□□□ -1.33
RNF40O75150 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF40O75150 BX276092.3-201ENST00000424182 230 ntBASIC6.75□□□□□ -1.33
RNF40O75150 RPL36P19-201ENST00000430744 301 ntBASIC6.75□□□□□ -1.33
RNF40O75150 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF40O75150 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 RPL7P49-201ENST00000471402 708 ntBASIC6.75□□□□□ -1.33
RNF40O75150 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 AC110792.1-201ENST00000491826 472 ntBASIC6.75□□□□□ -1.33
RNF40O75150 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF40O75150 AC011411.1-201ENST00000509592 876 ntBASIC6.75□□□□□ -1.33
RNF40O75150 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF40O75150 AC107393.1-201ENST00000512403 346 ntBASIC6.75□□□□□ -1.33
RNF40O75150 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF40O75150 CYCSP27-201ENST00000527643 293 ntBASIC6.75□□□□□ -1.33
RNF40O75150 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF40O75150 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms