Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA3O43365 AP001284.1-201ENST00000528393 2118 ntBASIC4.36□□□□□ -1.71
HOXA3O43365 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA3O43365 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA3O43365 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 AC002525.1-201ENST00000624392 1622 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HOXA3O43365 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 AC104964.3-201ENST00000606115 2860 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 Y_RNA.367-201ENST00000365544 101 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 RNU1-136P-201ENST00000384181 164 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 U3.29-201ENST00000391296 212 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
HOXA3O43365 DUTP5-201ENST00000406790 469 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC009161.1-201ENST00000417306 376 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 MTCYBP8-201ENST00000422855 651 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA3O43365 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA3O43365 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 AL772161.1-201ENST00000439130 476 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC073415.1-201ENST00000449240 153 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AL389915.2-201ENST00000454576 441 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AC026427.2-201ENST00000506228 536 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 SNORD27.1-201ENST00000516319 72 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 BTF3P12-201ENST00000519620 469 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 OR5BN1P-201ENST00000532955 829 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC005341.1-201ENST00000571086 708 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA3O43365 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC010928.3-201ENST00000587712 541 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 Mico1.1-201ENST00000611698 204 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 MTND4P35-201ENST00000604257 1375 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 AC010266.2-201ENST00000564741 3255 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA3O43365 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA3O43365 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HOXA3O43365 MAPK10-328ENST00000641553 4009 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 Z95331.1-201ENST00000623075 23112 ntBASIC4.35□□□□□ -1.71
HOXA3O43365 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 FRG1CP-201ENST00000358464 769 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 Y_RNA.22-201ENST00000362492 102 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 U3.11-201ENST00000364476 212 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 RNU1-106P-201ENST00000384382 164 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 RNU6-146P-201ENST00000384602 108 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 MIR558-201ENST00000384920 94 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXA3O43365 MIR550A3-201ENST00000390735 95 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 RNA5SP487-201ENST00000410186 122 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 RN7SKP247-201ENST00000411094 308 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA3O43365 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 DUTP6-201ENST00000425573 462 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC093655.2-201ENST00000425735 631 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AL590762.4-201ENST00000425885 253 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 AC138761.5-201ENST00000433967 325 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 IFNA20P-201ENST00000436840 528 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA3O43365 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 RN7SL97P-201ENST00000486780 299 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 SNRPCP2-201ENST00000504370 475 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC103851.1-201ENST00000506833 274 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 MTCO3P44-201ENST00000510977 541 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 RN7SKP66-201ENST00000516681 231 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA3O43365 AL355375.2-201ENST00000574825 175 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms