Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 AL390208.1-201ENST00000605885 644 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC090186.1-201ENST00000605991 572 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC239868.4-201ENST00000608318 671 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AC006329.2-201ENST00000611491 394 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC068792.1-201ENST00000621354 417 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN3O00409 AC025031.4-201ENST00000621248 3271 ntBASIC4.64□□□□□ -1.67
FOXN3O00409 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FOXN3O00409 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN3O00409 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
FOXN3O00409 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN3O00409 NMD3P1-201ENST00000439704 1488 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
FOXN3O00409 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN3O00409 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN3O00409 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN3O00409 RNU1-108P-201ENST00000362556 161 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 RNU6-343P-201ENST00000364709 104 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 RNU6-356P-201ENST00000384140 107 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 MIR3074-201ENST00000384885 81 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 U8.14-201ENST00000390843 143 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 RN7SKP142-201ENST00000411236 328 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 MTCO2P5-201ENST00000422621 426 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN3O00409 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 AC010153.1-201ENST00000432862 727 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.63□□□□□ -1.67
FOXN3O00409 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN3O00409 AL138878.2-201ENST00000440581 1241 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 COX6CP12-201ENST00000446748 202 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 SNRPGP9-201ENST00000456025 225 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN3O00409 BTF3P5-201ENST00000457252 467 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 RPS23P1-201ENST00000491662 432 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 AC106872.3-201ENST00000495104 446 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 OR5H5P-201ENST00000503164 928 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN3O00409 POU5F1P7-201ENST00000508759 541 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 IGLVIV-65-201ENST00000517313 360 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN3O00409 AP004247.1-201ENST00000531556 1289 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 RN7SL176P-201ENST00000580352 264 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN3O00409 AC005255.1-201ENST00000593748 216 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 AC022146.1-201ENST00000595307 847 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 PRELID3BP8-201ENST00000604148 295 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 RN7SKP299-201ENST00000606679 301 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 uc_338.13-201ENST00000618243 179 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 C2orf27A-204ENST00000623058 969 ntBASIC4.63□□□□□ -1.67
FOXN3O00409 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN3O00409 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
FOXN3O00409 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN3O00409 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
FOXN3O00409 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN3O00409 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN3O00409 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 KPNA2P2-201ENST00000419546 1489 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 SAGE4P-201ENST00000442271 3381 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.62□□□□□ -1.67
FOXN3O00409 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXN3O00409 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
FOXN3O00409 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 RNU6-761P-201ENST00000384148 107 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 OFD1P18Y-201ENST00000420889 959 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 RPS27AP12-201ENST00000429552 465 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 MTCYBP45-201ENST00000435243 565 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 HLA-N-201ENST00000437516 135 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 RPL23AP52-201ENST00000439311 478 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXN3O00409 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 TAF9P1-201ENST00000445421 515 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 RPL7P52-201ENST00000449200 742 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXN3O00409 TAF9P2-201ENST00000454958 515 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms