Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC107401.1-201ENST00000503426 685 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RPL37P25-201ENST00000507308 276 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 MRPS33P2-201ENST00000507850 322 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RNU6-27P-201ENST00000516146 107 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 HMGB3P26-201ENST00000560051 582 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC008745.1-201ENST00000604064 271 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC121334.2-201ENST00000605387 271 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 RNA5SP108-201ENST00000605921 117 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC009704.2-201ENST00000618739 483 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 PISRT1-201ENST00000626175 531 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AP000542.2-201ENST00000623199 6179 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 AC063976.2-201ENST00000425667 3556 ntBASIC4.78□□□□□ -1.64
PCDHGA3Q9Y5H0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
PCDHGA3Q9Y5H0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 Y_RNA.46-201ENST00000362695 102 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 RNU6-837P-201ENST00000391056 108 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 C1DP2-201ENST00000418167 426 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL35AP21-201ENST00000437667 333 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL21P133-201ENST00000443666 476 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL17P49-201ENST00000443728 411 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AL353691.1-201ENST00000451332 387 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC090686.1-201ENST00000481577 749 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 RPL9P33-201ENST00000484311 566 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AL358832.1-201ENST00000497800 389 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC105252.1-201ENST00000503089 286 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 TMEM248P1-201ENST00000510579 951 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 SNORA18.6-201ENST00000516792 115 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 MTCO2P4-201ENST00000517968 247 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AL157394.1-201ENST00000562983 1224 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC009063.1-201ENST00000563342 702 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AL669831.4-202ENST00000590817 238 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 CKS1BP3-201ENST00000600888 237 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC011451.2-201ENST00000604303 598 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 IGHV3-29-201ENST00000604817 344 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AC092794.1-201ENST00000612734 582 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 LINC00901.1-201ENST00000617252 152 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AL592182.3-201ENST00000642132 3304 ntBASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PCDHGA3Q9Y5H0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC011460.1-201ENST00000636268 1834 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC099654.2-201ENST00000433031 1980 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 AC008033.1-201ENST00000216407 1162 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 SNORA2.3-201ENST00000383920 135 ntBASIC4.76□□□□□ -1.65
PCDHGA3Q9Y5H0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms