Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Z82190.1-201ENST00000454534 490 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC099563.1-201ENST00000456086 418 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 ACTR3P3-201ENST00000480448 893 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AL358832.1-201ENST00000497800 389 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC133555.2-201ENST00000550213 292 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC009977.1-201ENST00000586015 570 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AL022154.1-201ENST00000604698 785 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC090578.1-201ENST00000604955 591 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 FAM27B-201ENST00000610601 213 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC104010.1-201ENST00000616889 150 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 AC072046.2-201ENST00000618366 268 ntBASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDHB1Q9Y5F3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 MAPK10-286ENST00000641208 8747 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 RPL17P36-201ENST00000420302 549 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL035410.1-201ENST00000427409 427 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 MTND3P21-201ENST00000433774 331 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 RPL22P17-201ENST00000438729 315 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 SDCBPP1-201ENST00000440192 890 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 PGBD4P3-201ENST00000440731 581 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL022238.1-201ENST00000442557 355 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 BX276092.4-201ENST00000452056 248 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC013356.1-201ENST00000489027 564 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC093677.1-201ENST00000514414 678 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 RN7SKP122-201ENST00000515923 296 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 MTND4LP26-201ENST00000518144 282 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AP003467.2-201ENST00000520175 319 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC093249.4-201ENST00000564755 259 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL009028.1-201ENST00000604895 802 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC113194.1-201ENST00000606037 500 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC010857.1-201ENST00000606398 594 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC009237.17-201ENST00000618111 748 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC015871.5-202ENST00000623252 701 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 MIR4496-201ENST00000635896 61 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 MIR6830-201ENST00000636015 70 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AL049780.3-201ENST00000624612 1583 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC093535.2-201ENST00000624769 2326 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 ASNSP1-201ENST00000518311 1939 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 CCT4P2-201ENST00000233836 1548 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 DHX40P1-201ENST00000588725 1412 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.72□□□□□ -1.65
PCDHB1Q9Y5F3 AC015813.6-201ENST00000624409 5808 ntBASIC4.71□□□□□ -1.65
PCDHB1Q9Y5F3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB1Q9Y5F3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB1Q9Y5F3 MTND5P26-201ENST00000426018 1752 ntBASIC4.71□□□□□ -1.66
PCDHB1Q9Y5F3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB1Q9Y5F3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms