Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 VN1R10P-201ENST00000447106 875 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 PDSS1P2-201ENST00000449397 678 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 CYCSP34-201ENST00000458172 304 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 KLF3P2-201ENST00000465138 268 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AP000797.1-201ENST00000478870 387 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 FCF1P3-201ENST00000496394 590 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 HMGB1P21-201ENST00000502313 581 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 RNA5SP497-201ENST00000516081 97 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AP000827.1-201ENST00000527814 258 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 SLC2A13P1-201ENST00000531560 322 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AC068831.4-201ENST00000556118 109 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 SNORA59B-202ENST00000578183 701 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 SLC25A36P1-201ENST00000590111 465 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-88P-201ENST00000606801 100 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AP002360.3-201ENST00000607673 710 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 AL356321.1-201ENST00000621360 228 ntBASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTDP1Q9Y5B0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-433P-201ENST00000363216 104 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 SNORA51.12-201ENST00000384448 134 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 RPS24P12-201ENST00000402084 394 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 MTND4LP20-201ENST00000402379 270 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 SNRPFP1-201ENST00000414761 252 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC245052.5-201ENST00000416320 649 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AL121601.2-201ENST00000438019 707 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AL671855.1-201ENST00000446875 1203 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC104651.2-201ENST00000447549 528 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 NDUFS5P3-201ENST00000450668 321 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 RPL7P24-201ENST00000493052 752 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC118273.2-201ENST00000532092 465 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC004217.3-201ENST00000551552 878 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 MIR4458-201ENST00000578872 75 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AC025253.1-201ENST00000613623 543 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 OR52H1-202ENST00000641796 1061 ntBASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CTDP1Q9Y5B0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 MTND4P16-201ENST00000466108 1367 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 Y_RNA.25-201ENST00000362528 102 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RNU5F-6P-201ENST00000362979 116 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-694P-201ENST00000364071 147 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-723P-201ENST00000383973 107 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RNU6-1122P-201ENST00000384449 107 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 Y_RNA.554-201ENST00000384672 102 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RPL17P50-201ENST00000396131 546 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 CCDC58P2-201ENST00000417131 366 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 CKS1BP6-201ENST00000424932 240 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AL645939.1-201ENST00000453429 797 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AL161747.1-201ENST00000480068 358 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 RPL9P6-201ENST00000492764 598 ntBASIC5.22□□□□□ -1.57
CTDP1Q9Y5B0 AC023424.2-201ENST00000493479 777 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms