Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC138853.1-201ENST00000503549 823 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 RNU6-488P-201ENST00000515918 99 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AP001781.1-201ENST00000530977 207 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ZNF519P3-201ENST00000557158 1032 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC084783.1-201ENST00000565846 910 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC091489.2-201ENST00000566263 604 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC017100.2-201ENST00000584628 355 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 VN1R79P-201ENST00000593540 513 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC015871.2-201ENST00000603605 948 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC007684.1-201ENST00000609671 477 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC024941.1-201ENST00000612250 334 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 U6.42-201ENST00000618440 107 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL356596.1-201ENST00000624230 379 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AL133412.1-201ENST00000380194 2992 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DKK3Q9UBP4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 AC022893.2-201ENST00000564832 3296 ntBASIC4.63□□□□□ -1.67
DKK3Q9UBP4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC092162.3-201ENST00000624511 1624 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 RNA5SP479-201ENST00000364858 117 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 MIR124-3-201ENST00000384866 87 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC104651.1-201ENST00000427559 735 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 DNAJC19P4-201ENST00000440115 345 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AL831737.1-201ENST00000441288 271 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 SNORD42A-201ENST00000459584 64 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AP000797.1-201ENST00000478870 387 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 DEFB109F-201ENST00000491870 277 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC087883.1-201ENST00000551882 391 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 MIR4644-201ENST00000579929 84 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 MIR4715-201ENST00000584117 79 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC115085.1-201ENST00000588924 229 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC008782.1-201ENST00000603386 430 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC115286.1-201ENST00000604298 434 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 U4.5-201ENST00000617137 123 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC055839.1-201ENST00000634467 498 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AL031985.3-201ENST00000565390 2449 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DKK3Q9UBP4 AC095050.2-201ENST00000510748 1458 ntBASIC4.62□□□□□ -1.67
DKK3Q9UBP4 A2MP1-204ENST00000566278 4130 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 MTND1P21-201ENST00000412991 285 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 RPS27AP14-201ENST00000422868 454 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 MTND3P21-201ENST00000433774 331 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 RPL7P28-201ENST00000437739 740 ntBASIC4.61□□□□□ -1.67
DKK3Q9UBP4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.61□□□□□ -1.67
DKK3Q9UBP4 TRGVB-201ENST00000453257 471 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms