Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 ZNF734P-201ENST00000419494 1534 ntBASIC3.79□□□□□ -1.8
CCSER1Q9C0I3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 RNU6-837P-201ENST00000391056 108 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 OR51A3P-201ENST00000413596 924 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 MTND2P16-201ENST00000419987 799 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 HMGB1P45-201ENST00000435986 653 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 RAB11AP1-201ENST00000442978 646 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 PRDX3P3-201ENST00000447765 522 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 RPL21P13-201ENST00000488305 481 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC093663.1-201ENST00000497190 394 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 RN7SKP116-201ENST00000516902 319 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 CR383656.14-201ENST00000551951 406 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 CCDC58P3-201ENST00000590792 430 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC024220.1-201ENST00000603675 484 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC093875.1-201ENST00000623688 504 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 AC000367.1-201ENST00000452711 1766 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 SGO1P1-201ENST00000603525 1447 ntBASIC3.78□□□□□ -1.8
CCSER1Q9C0I3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CCSER1Q9C0I3 ZNF37BP-203ENST00000452306 1352 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 RNU6-335P-201ENST00000364563 113 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC246680.2-201ENST00000422106 389 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 DEFB130D-201ENST00000426866 237 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 ARF4P2-201ENST00000430209 526 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AL034418.1-201ENST00000448675 860 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 HMGB3P8-201ENST00000449709 577 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 CDC42P1-201ENST00000456658 548 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 SYPL1P1-201ENST00000473622 768 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 OR4R2P-201ENST00000530815 597 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC007458.1-201ENST00000542812 373 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC092470.1-201ENST00000546187 132 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 ZNF192P1-203ENST00000565888 810 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 MIR3908-201ENST00000579798 126 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 SNRPGP15-201ENST00000600149 222 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC009948.4-201ENST00000604692 675 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC026741.1-201ENST00000605892 482 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC068722.2-201ENST00000618734 544 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 SNORD39.4-201ENST00000620099 78 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AC004777.1-201ENST00000624317 287 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 AL590396.4-201ENST00000636779 956 ntBASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CCSER1Q9C0I3 MTND5P31-201ENST00000419366 1374 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 RNU1-75P-201ENST00000347264 129 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 RNU1-33P-201ENST00000364249 162 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 RNU6-441P-201ENST00000384545 106 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 MIR16-1-201ENST00000385271 89 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 MT-TC-201ENST00000387405 66 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 RNU6-932P-201ENST00000391108 106 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 BX842559.1-201ENST00000419615 532 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 GLRXP1-201ENST00000423261 334 ntBASIC3.76□□□□□ -1.81
CCSER1Q9C0I3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms