Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC021146.7-201ENST00000509604 775 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 OR5D17P-201ENST00000531492 978 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 TRAV37-201ENST00000553906 342 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC005242.1-201ENST00000585658 438 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AP004372.1-201ENST00000604842 844 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC124312.4-201ENST00000605533 310 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC117490.2-201ENST00000610042 594 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC048347.1-201ENST00000624621 427 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 AC007256.1-201ENST00000392253 2765 ntBASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.62□□□□□ -1.83
UPF3BQ9BZI7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 SNORA54-201ENST00000384281 123 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 MIR153-1-201ENST00000384914 90 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 MTND4LP20-201ENST00000402379 270 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 HSPE1P26-201ENST00000405341 275 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 ARL5AP3-201ENST00000439327 386 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC005002.1-201ENST00000447458 540 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 SLC31A1P1-201ENST00000451221 567 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 RPL21P41-201ENST00000459863 264 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC080014.1-201ENST00000496877 1201 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 RPL7L1P13-201ENST00000511702 739 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 PTP4A1P6-201ENST00000531034 478 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AP002404.1-201ENST00000532005 451 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 CR383656.14-201ENST00000551951 406 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 MTND4LP24-201ENST00000572277 291 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC112503.1-201ENST00000608436 391 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 AC006065.5-201ENST00000623427 349 ntBASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.61□□□□□ -1.83
UPF3BQ9BZI7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 MIR449A-201ENST00000362113 91 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AL139095.1-201ENST00000404326 391 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 RPL7P8-201ENST00000411964 730 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 RPL23AP69-201ENST00000431134 458 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AC107083.1-201ENST00000439643 279 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 OR2A20P-203ENST00000498397 1268 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AC078918.1-201ENST00000498515 228 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 RNA5SP380-201ENST00000517190 98 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 RNU4-60P-201ENST00000517239 135 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AC025857.1-201ENST00000525252 377 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AP003117.1-201ENST00000602771 554 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AL450472.3-201ENST00000615578 367 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 PLCE1P1-201ENST00000622094 305 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AL137790.1-201ENST00000634283 177 ntBASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UPF3BQ9BZI7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 RNA5SP80-201ENST00000410475 111 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 OOSP1P1-201ENST00000423265 274 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC012498.1-201ENST00000424037 437 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 MED6P1-201ENST00000439659 713 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 RN7SL633P-201ENST00000488974 297 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC118282.1-201ENST00000506408 765 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC119751.1-201ENST00000513357 765 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 RN7SKP43-201ENST00000516173 320 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC016877.3-201ENST00000606778 504 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 AC084036.1-201ENST00000609190 508 ntBASIC3.59□□□□□ -1.83
UPF3BQ9BZI7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.59□□□□□ -1.84
UPF3BQ9BZI7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
UPF3BQ9BZI7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.58□□□□□ -1.84
UPF3BQ9BZI7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms