Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 ATP5F1P4-201ENST00000397288 746 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 HSPE1P8-201ENST00000406997 288 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 MTATP6P20-201ENST00000414147 562 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 RPS3AP37-201ENST00000419176 745 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 MTCO3P1-205ENST00000422088 832 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL445584.1-201ENST00000431451 330 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 USP9YP24-201ENST00000434374 697 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 EEF1A1P39-201ENST00000440791 250 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 USP9YP17-201ENST00000444617 696 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL606517.1-201ENST00000446914 387 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC010307.1-201ENST00000467206 836 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC010301.1-201ENST00000473936 355 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 ACTR3P3-201ENST00000480448 893 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 RPL23AP44-201ENST00000482216 473 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 BOLA3P3-201ENST00000505182 232 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC104057.1-201ENST00000515547 497 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 RNU1-45P-201ENST00000517191 141 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC023632.4-201ENST00000517783 191 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AP001189.2-201ENST00000527320 189 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 OR8L1P-201ENST00000534005 955 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 LSM6P2-201ENST00000552208 177 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL132857.1-201ENST00000555180 708 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AL050303.3-201ENST00000613704 284 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC068722.2-201ENST00000618734 544 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 NMD3P1-201ENST00000439704 1488 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC117529.2-201ENST00000512159 2068 ntBASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
CCM2Q9BSQ5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 SNORA40.2-201ENST00000390847 128 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 RNU4-22P-201ENST00000411058 166 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 HMGB3P20-201ENST00000417997 600 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC007435.1-201ENST00000421086 415 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 NANOGP2-201ENST00000435391 727 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 GTF2IP7-202ENST00000436677 309 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AL589880.1-201ENST00000448271 287 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 ZNF886P-201ENST00000450781 723 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC099563.1-201ENST00000456086 418 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC005410.1-202ENST00000460347 485 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 RN7SL542P-201ENST00000467147 294 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 RPL5P23-201ENST00000496040 868 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 RNF138P1-201ENST00000502765 546 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 HIGD1AP3-201ENST00000515857 278 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 SNORA48.10-201ENST00000516965 160 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 ARL2BPP5-201ENST00000523141 481 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 GTF2IP8-201ENST00000560687 584 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AL133457.1-201ENST00000564251 987 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC034105.4-201ENST00000568304 277 ntBASIC3.63□□□□□ -1.83
CCM2Q9BSQ5 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms