Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC114546.3-201ENST00000623582 1734 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 ASNSP1-201ENST00000518311 1939 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AL445437.1-201ENST00000623157 3087 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AL672296.1-201ENST00000427780 2158 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 SNORA48.8-201ENST00000391324 134 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 U3.42-201ENST00000408746 214 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 SEC63P1-201ENST00000425785 1258 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 RPS24P8-201ENST00000431490 402 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AL135938.1-201ENST00000443141 297 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 RPL21P41-201ENST00000459863 264 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 USP9YP5-201ENST00000511770 630 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 SETP12-201ENST00000514068 805 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC007566.2-201ENST00000603642 413 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 MIR1264-201ENST00000616374 69 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 CYCSP41-201ENST00000616920 296 ntBASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.14□□□□□ -1.75
CCDC7Q96M83 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC7Q96M83 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC008725.1-201ENST00000605123 2263 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC7Q96M83 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 RNU2-17P-201ENST00000410290 190 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 XKRYP4-201ENST00000414395 483 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 PTP4A1P3-201ENST00000433661 420 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 MED6P1-201ENST00000439659 713 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 XKRYP5-201ENST00000449659 483 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 DNAJC19P8-201ENST00000452887 259 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC108729.2-201ENST00000476543 840 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 OR5G4P-201ENST00000525251 760 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC015871.2-201ENST00000603605 948 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC245100.7-201ENST00000609678 442 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 AC013412.1-201ENST00000610687 192 ntBASIC4.13□□□□□ -1.75
CCDC7Q96M83 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC7Q96M83 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AL353743.4-201ENST00000422653 1547 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC7Q96M83 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC233263.6-201ENST00000631132 1963 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC7Q96M83 HMGB1P10-201ENST00000395823 563 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 HMGB1P13-201ENST00000406019 642 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 RNA5SP274-201ENST00000410484 108 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 RPS6P12-201ENST00000432491 726 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC093156.1-201ENST00000440382 670 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 RPL7P59-201ENST00000447700 943 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC112492.1-201ENST00000449607 712 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 RPL23AP23-201ENST00000452590 471 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC008481.1-201ENST00000463278 396 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 PRELID3BP6-201ENST00000503839 571 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC111193.1-201ENST00000504097 155 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC7Q96M83 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 MIR3945-201ENST00000581853 98 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 ELOCP29-201ENST00000588193 334 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC103881.1-201ENST00000603476 538 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AL355816.1-201ENST00000607951 118 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC7Q96M83 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC7Q96M83 RNF6P1-201ENST00000444889 1784 ntBASIC4.12□□□□□ -1.75
CCDC7Q96M83 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC7Q96M83 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms