Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AC107027.3-201ENST00000565095 3473 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 RNU1-89P-201ENST00000384592 164 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 TAF9P1-201ENST00000445421 515 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 HMGB3P8-201ENST00000449709 577 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AL121877.1-201ENST00000453704 622 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 TAF9P2-201ENST00000454958 515 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AC108729.3-201ENST00000513484 108 ntBASIC1.8□□□□□ -2.12
CSMD3Q7Z407 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD3Q7Z407 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC090229.1-201ENST00000590983 1609 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 MORF4L1P6-201ENST00000418771 268 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AL356320.1-201ENST00000429616 163 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 PPIAP17-201ENST00000438507 471 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 HMGB1P48-201ENST00000446155 598 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 HIGD1AP2-201ENST00000446367 280 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC034244.2-201ENST00000514668 858 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AL109741.3-201ENST00000561748 592 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC009101.1-201ENST00000568135 242 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC109315.1-201ENST00000584143 1347 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 OR5AQ1P-203ENST00000641818 1529 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 RAD1P1-201ENST00000231383 813 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 RPS6P2-201ENST00000454208 705 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC106872.3-201ENST00000495104 446 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC008277.2-201ENST00000605196 797 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC104454.1-201ENST00000421341 1401 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 SNORD114-1-201ENST00000362705 72 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 Y_RNA.269-201ENST00000364685 89 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC009414.1-201ENST00000427200 443 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AL359821.1-201ENST00000605519 182 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 AC092628.2-201ENST00000622492 339 ntBASIC1.79□□□□□ -2.12
CSMD3Q7Z407 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD3Q7Z407 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 GCNT6-201ENST00000379591 934 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 RNU2-22P-201ENST00000411266 212 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC127526.1-201ENST00000417526 366 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AL121882.1-201ENST00000422893 417 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 RPS12P2-201ENST00000439728 269 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC096638.1-201ENST00000444678 216 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC068657.1-201ENST00000520807 306 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC090695.1-201ENST00000561269 1222 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC004696.1-201ENST00000614345 607 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 CRYM-AS1-204ENST00000637983 556 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AL606537.1-201ENST00000607258 2011 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 U8.13-201ENST00000390842 128 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 RNU4-53P-201ENST00000410828 140 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AL662791.1-201ENST00000441992 928 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC010198.2-201ENST00000550612 259 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AP005136.1-201ENST00000579765 429 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC090115.4-201ENST00000609970 188 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC078899.5-201ENST00000612475 178 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 MIR6845-201ENST00000613182 61 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 AC103858.2-201ENST00000621471 543 ntBASIC1.78□□□□□ -2.12
CSMD3Q7Z407 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CSMD3Q7Z407 RNU6-618P-201ENST00000363518 112 ntBASIC1.78□□□□□ -2.13
CSMD3Q7Z407 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 RNU6-253P-201ENST00000384730 105 ntBASIC1.78□□□□□ -2.13
CSMD3Q7Z407 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 FCF1P1-201ENST00000432690 571 ntBASIC1.78□□□□□ -2.13
CSMD3Q7Z407 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC1.78□□□□□ -2.13
CSMD3Q7Z407 AC022069.1-201ENST00000582910 658 ntBASIC1.78□□□□□ -2.13
CSMD3Q7Z407 MIR4781-201ENST00000585250 76 ntBASIC1.78□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms