Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RNU6-878P-201ENST00000384578 110 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 MIR192-201ENST00000384915 110 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC127391.1-201ENST00000411737 98 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC009302.1-201ENST00000417147 390 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC013429.2-201ENST00000418798 781 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC012065.2-201ENST00000421295 375 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 OR51AB1P-201ENST00000429046 620 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AL354714.3-201ENST00000447284 493 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC239809.1-201ENST00000450470 217 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 HMGB1P15-201ENST00000453854 435 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 RPS20P32-201ENST00000456044 356 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 RPL23AP41-201ENST00000484754 458 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC079382.1-201ENST00000493346 557 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AL359212.1-201ENST00000556608 614 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC009101.1-201ENST00000568135 242 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 UBE2V2P2-201ENST00000587677 504 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 MIR98-201ENST00000606724 119 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AL133173.2-201ENST00000614270 90 ntBASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.58□□□□□ -1.52
RUFY4Q6ZNE9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL354685.2-201ENST00000448218 1447 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-1322P-201ENST00000364309 107 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 SNORA2.3-201ENST00000383920 135 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 SNORA77-201ENST00000408716 125 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL359704.1-201ENST00000411586 781 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL590139.1-201ENST00000416267 400 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 RPL21P111-201ENST00000418453 477 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 SNRPEP10-201ENST00000420249 274 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC093414.1-201ENST00000434712 514 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 SDCBPP1-201ENST00000440192 890 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 RNF138P1-201ENST00000502765 546 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AL161616.1-201ENST00000611867 286 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC000123.2-201ENST00000623124 461 ntBASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RUFY4Q6ZNE9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC007529.1-201ENST00000418574 2178 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 RN7SKP113-201ENST00000363891 295 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 RNA5SP223-201ENST00000365174 120 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 Y_RNA.409-201ENST00000383990 98 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 RNU6-1009P-201ENST00000390996 107 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 BTBD10P2-201ENST00000404779 676 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 RPL31P52-201ENST00000407532 367 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AMD1P2-201ENST00000412936 992 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 OR51A5P-201ENST00000415429 942 ntBASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.56□□□□□ -1.52
RUFY4Q6ZNE9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms