Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 OR5D17P-201ENST00000531492 978 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC092470.1-201ENST00000546187 132 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC008015.1-201ENST00000555505 465 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AL133457.1-201ENST00000564251 987 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC007566.2-201ENST00000603642 413 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC090948.1-201ENST00000607464 549 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC245297.2-201ENST00000610119 565 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC231657.1-201ENST00000624313 397 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC048347.1-201ENST00000624621 427 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 U3.53-201ENST00000628922 216 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 MIR492-201ENST00000638676 116 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC097504.1-201ENST00000515103 2415 ntBASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDLIM3Q53GG5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 PABPC1P7-201ENST00000413177 1513 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RNU6-216P-201ENST00000363282 104 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RNA5SP513-201ENST00000364648 118 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 SNORD6-201ENST00000365444 73 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RNU6-1200P-201ENST00000384162 107 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RNU6-253P-201ENST00000384730 105 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC119751.3-201ENST00000399720 670 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RNU6ATAC-201ENST00000408749 126 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RNA5SP104-201ENST00000410989 118 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC011933.1-201ENST00000413334 321 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RPL21P112-201ENST00000434403 463 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 SLC31A1P1-201ENST00000451221 567 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC116533.1-201ENST00000459748 321 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RPL7P15-201ENST00000461190 712 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC008481.1-201ENST00000463278 396 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC104763.1-201ENST00000475274 360 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 LINC00888-204ENST00000487386 421 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RPL7P38-201ENST00000488396 739 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AP000563.1-201ENST00000490865 758 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 HSPE1P23-201ENST00000509838 286 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC119751.5-201ENST00000514077 770 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AP001636.2-201ENST00000525517 696 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 OR5M7P-201ENST00000526140 972 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 OSBPL9P5-201ENST00000542581 171 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 SULT1C2P1-202ENST00000562418 459 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 CYP4A43P-201ENST00000568156 121 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC012435.1-202ENST00000568772 240 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 MAGOH2P-202ENST00000584384 429 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC015813.4-201ENST00000610469 179 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC008083.4-201ENST00000615076 444 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 AC007546.2-201ENST00000623996 360 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 RAD17P1-201ENST00000418130 2042 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 MTND5P24-201ENST00000438892 1767 ntBASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.61□□□□□ -1.83
PDLIM3Q53GG5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 RNA5SP52-201ENST00000362448 134 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 RNU6-374P-201ENST00000364146 108 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 RNVU1-3-201ENST00000364313 161 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 MIR93-201ENST00000385024 80 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 RPL23AP29-201ENST00000397284 453 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 HSPE1P26-201ENST00000405341 275 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 AL356131.1-201ENST00000405826 414 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 TPT1P2-201ENST00000413105 503 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 MTND2P18-201ENST00000419962 1030 ntBASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM3Q53GG5 MTCYBP24-201ENST00000420387 1106 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms