Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.8□□□□□ -2.12
RPS28P62857 FABP12P1-201ENST00000401911 322 ntBASIC1.8□□□□□ -2.12
RPS28P62857 MTND4LP20-201ENST00000402379 270 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL122016.1-201ENST00000403365 367 ntBASIC1.8□□□□□ -2.12
RPS28P62857 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 SNORD23.1-201ENST00000408212 104 ntBASIC1.8□□□□□ -2.12
RPS28P62857 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.8□□□□□ -2.12
RPS28P62857 RNU6-920P-201ENST00000410926 92 ntBASIC1.8□□□□□ -2.12
RPS28P62857 HMGN1P24-201ENST00000412282 298 ntBASIC1.8□□□□□ -2.12
RPS28P62857 Z99755.1-201ENST00000414048 380 ntBASIC1.8□□□□□ -2.12
RPS28P62857 SNRPFP1-201ENST00000414761 252 ntBASIC1.8□□□□□ -2.12
RPS28P62857 SEPT2P1-201ENST00000419651 180 ntBASIC1.8□□□□□ -2.12
RPS28P62857 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 AC098614.2-201ENST00000426040 255 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC007560.1-201ENST00000426912 237 ntBASIC1.8□□□□□ -2.12
RPS28P62857 FABP5P3-201ENST00000437960 408 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 AC007790.1-201ENST00000439081 782 ntBASIC1.8□□□□□ -2.12
RPS28P62857 FGF7P5-201ENST00000441829 291 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL031681.1-201ENST00000443304 400 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL359073.1-201ENST00000448036 403 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC1.8□□□□□ -2.12
RPS28P62857 RN7SL798P-201ENST00000468562 301 ntBASIC1.8□□□□□ -2.12
RPS28P62857 RPS3AP43-201ENST00000479743 781 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC090255.1-201ENST00000495779 349 ntBASIC1.8□□□□□ -2.12
RPS28P62857 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 MTCYBP17-201ENST00000503579 789 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC1.8□□□□□ -2.12
RPS28P62857 MRPS33P2-201ENST00000507850 322 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC093770.1-201ENST00000511559 571 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC134698.1-201ENST00000511619 643 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 RNA5SP164-201ENST00000516533 110 ntBASIC1.8□□□□□ -2.12
RPS28P62857 IGHVII-49-1-201ENST00000521760 224 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 CASP1P1-201ENST00000526345 212 ntBASIC1.8□□□□□ -2.12
RPS28P62857 HAUS8P1-201ENST00000549005 542 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC091516.1-201ENST00000549191 703 ntBASIC1.8□□□□□ -2.12
RPS28P62857 HIGD1AP1-201ENST00000550979 275 ntBASIC1.8□□□□□ -2.12
RPS28P62857 HMGB1P14-201ENST00000557424 591 ntBASIC1.8□□□□□ -2.12
RPS28P62857 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 AL138976.2-201ENST00000563989 694 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 AC012669.1-201ENST00000603209 283 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL133338.2-201ENST00000604292 736 ntBASIC1.8□□□□□ -2.12
RPS28P62857 SUMO2P14-201ENST00000604488 293 ntBASIC1.8□□□□□ -2.12
RPS28P62857 SNORA62.6-201ENST00000606322 83 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 AL512329.2-201ENST00000607350 548 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC092266.1-201ENST00000610958 165 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC012409.3-201ENST00000611343 981 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPS28P62857 AC008115.3-201ENST00000614874 549 ntBASIC1.8□□□□□ -2.12
RPS28P62857 SNORD39.4-201ENST00000620099 78 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC079684.1-201ENST00000621405 437 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC010338.1-201ENST00000621823 717 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AC040168.1-201ENST00000623594 991 ntBASIC1.8□□□□□ -2.12
RPS28P62857 AL109659.3-201ENST00000624985 950 ntBASIC1.8□□□□□ -2.12
RPS28P62857 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC1.8□□□□□ -2.12
RPS28P62857 CR589904.1-203ENST00000636515 318 ntBASIC1.8□□□□□ -2.12
RPS28P62857 U6.107-201ENST00000637108 79 ntBASIC1.8□□□□□ -2.12
RPS28P62857 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
RPS28P62857 AL355596.1-201ENST00000565399 3996 ntBASIC1.8□□□□□ -2.12
RPS28P62857 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.8□□□□□ -2.12
RPS28P62857 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPS28P62857 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
RPS28P62857 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPS28P62857 MIR375-201ENST00000362103 64 ntBASIC1.79□□□□□ -2.12
RPS28P62857 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPS28P62857 NFIB-202ENST00000380924 840 ntTSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RPS28P62857 RNU6-1197P-201ENST00000391183 107 ntBASIC1.79□□□□□ -2.12
RPS28P62857 RNU2-40P-201ENST00000410833 196 ntBASIC1.79□□□□□ -2.12
RPS28P62857 RNU6-272P-201ENST00000411028 104 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC008280.1-201ENST00000418851 412 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC234781.2-201ENST00000426370 994 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AL035410.1-201ENST00000427409 427 ntBASIC1.79□□□□□ -2.12
RPS28P62857 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC1.79□□□□□ -2.12
RPS28P62857 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.79□□□□□ -2.12
RPS28P62857 AL138899.2-201ENST00000439139 499 ntBASIC1.79□□□□□ -2.12
RPS28P62857 XKRY2-201ENST00000442362 1093 ntBASIC1.79□□□□□ -2.12
RPS28P62857 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.79□□□□□ -2.12
RPS28P62857 MTCYBP3-201ENST00000445588 1137 ntBASIC1.79□□□□□ -2.12
RPS28P62857 AURKAPS2-201ENST00000454983 333 ntBASIC1.79□□□□□ -2.12
RPS28P62857 RPS3AP41-201ENST00000462701 778 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms